Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1398 ATGGGGAAGAAGAAGAAGAGAAGTAGGGTTCTTGGTGTGGAGAAAACAGCATCTCAACAGGAAATAAAGAAGGCATACTACAAGTTGGCATTGAGGCTGCATCCTGATAAGAACCCCGGTGATGAGGAGGCTAAAGCAAAGTTTCAGCAATTGCAAAGTGTTATCTCAATTCTTGGGGATGAAGAAAAACGGGCTGTTTATGATCAGACTGGTTGTGTTGATGATGCTGAGCTTGCAGGGGATGTTGTTCAGAATCTTAAAGAATATTTCAGAGCAATGTACAAAAAGGTCACTGAAGCTGATATTGAGGAGTTTGAAGCAAACTATAGGGGATCTGACTCTGAGAAAAGTGATTTAATTGATCTGTACAAGAAGTACAAGGGTAGTATGAACAGGCTATTCTGTTCAATGCTTTGTTCAGATCCTAAACTTGACTCACACCGATTCAAGGATATTATTGATGAGGCTATAGCTGCTGGAGAACTAAAGGAAACAAAAGCCTTCAAGAAATGGGCAAAGAAAATATCAGAAACCAAGCCACCAACTAGTCCCTTAAGAAGGAAGGCAAAATCATCAAATAAGCAATCAGACAAAGATCTGTATGCTATGATATCACAACGTGGATCTGCGAGGAAAGACCGCTTTGATTCTATGTTCTCATCTCTAATTTCAAAGTATGGCGGGGGTCAAATGCCAGAACCCTCTGAAGAGGAATTTGAAGCTGCACAGAGAAAGGTGGAAAGAGGAAGGTCCTCAAAAAAGTCAAAGCAAAAATAA 777 0.4041 MGKKKKRSRVLGVEKTASQQEIKKAYYKLALRLHPDKNPGDEEAKAKFQQLQSVISILGDEEKRAVYDQTGCVDDAELAGDVVQNLKEYFRAMYKKVTEADIEEFEANYRGSDSEKSDLIDLYKKYKGSMNRLFCSMLCSDPKLDSHRFKDIIDEAIAAGELKETKAFKKWAKKISETKPPTSPLRRKAKSSNKQSDKDLYAMISQRGSARKDRFDSMFSSLISKYGGGQMPEPSEEEFEAAQRKVERGRSSKKSKQK 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1398 258 MobiDBLite consensus disorder prediction 177 213 - -
Aed8g1398 258 SMART dnaj_3 5 63 IPR001623 -
Aed8g1398 258 MobiDBLite consensus disorder prediction 177 195 - -
Aed8g1398 258 MobiDBLite consensus disorder prediction 225 258 - -
Aed8g1398 258 CDD DnaJ 10 60 IPR001623 -
Aed8g1398 258 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 8 258 - -
Aed8g1398 258 Gene3D DnaJ domain 3 91 IPR036869 -
Aed8g1398 258 PRINTS DnaJ domain signature 63 82 IPR001623 -
Aed8g1398 258 PRINTS DnaJ domain signature 8 26 IPR001623 -
Aed8g1398 258 PRINTS DnaJ domain signature 26 41 IPR001623 -
Aed8g1398 258 PRINTS DnaJ domain signature 43 63 IPR001623 -
Aed8g1398 258 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Aed8g1398 258 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 8 258 IPR042977 -
Aed8g1398 258 SUPERFAMILY Chaperone J-domain 9 77 IPR036869 -
Aed8g1398 258 Pfam DnaJ domain 10 68 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1398 Aed-Chr8 18341057 18344122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1398 10 68 C2H2 Transcription Factor Family AT1G74250 42.188 6.23e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1398 K09529 - gmx:100781463 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1398 8 18341057 18344122 Aed8g1398 8 18341057 18344122 ECH
Aed4g0422 4 3005530 3008365 Aed8g1398 8 18341057 18344122 PCT