Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1397 ATGGAGAGTAGTGGCAAGATGGAAGACTATGAAGTGATTCAGCAGATTGGAAGAGGAGCACTTGGTGCAACTTTTCTTGTTCAACACAAGATTGAGAACAAGAGGTATGTGCTTAAGAAAATTCGCCTGGCCAAGCAAGCAGACAAGTCCAAAGTGACAGCACAGCAAGAGATGGACCTGATAGCAAAACTAAATTACCCTTACATTGTGGAGTACAAAGATGCTTGGGTGGTGAAGGATGACTACATATGCATTATAACTGGCTATTGTGAAGGAGGTGACATGGCTGCGAATATAAAGAAGGCTCGTGGATCTTATTTTTCGGAGGAGTGTTCCAACATATTCCTGACCAAAGAAAATAACATTCGGCTAGGTGAATTTGGTCTTGCAAAGCTTCTTAATACCGAAGACCTTGCTTCCCCGGAAACAACTTATCAAGAGCATGCTGAGGAAAAATCCAGAACATAG 468 0.4231 MESSGKMEDYEVIQQIGRGALGATFLVQHKIENKRYVLKKIRLAKQADKSKVTAQQEMDLIAKLNYPYIVEYKDAWVVKDDYICIITGYCEGGDMAANIKKARGSYFSEECSNIFLTKENNIRLGEFGLAKLLNTEDLASPETTYQEHAEEKSRT 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1397 155 ProSiteProfiles Protein kinase domain profile. 10 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1397 155 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 4 110 - -
Aed8g1397 155 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 111 141 - -
Aed8g1397 155 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 4 110 - -
Aed8g1397 155 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 111 141 - -
Aed8g1397 155 Gene3D Phosphorylase Kinase; domain 1 1 89 - -
Aed8g1397 155 SMART serkin_6 10 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1397 155 SUPERFAMILY Protein kinase-like (PK-like) 7 140 IPR011009 -
Aed8g1397 155 Pfam Protein kinase domain 10 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1397 Aed-Chr8 18313129 18323837 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1397 7 152 AGC Kinase Gene Family AT1G45160 25.134 5.15e-10 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Aed8g1397 Pkinase 2.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1397 K08857 - gmx:100818558 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0423 4 3010064 3016467 Aed8g1397 8 18313129 18323837 PCT