Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1381 ATGCTTAGATCACTATTCTTGCTATGTATCTTCATTGGCTTCTTGTTATATTCTGTTGTGGGAGCTGAGATTCCATTGGGTTCCAAACTCTCCGTGGTTGGCAATGACTATTGGGTTTCTTCCAATGGTGATTTTGCAATTGGATTCTTCAACATTTCAGATCAACCTAACCAGTTTAGTGTTGGCATTAGATTCAACTCCAAGTCTATTCCACATAGCCAACAAACTGTGATTTGGGTTGCTGGTAGTGGTCTCAAAGTAGGTAACAAGTCCTACTTTGAACTCACTCATGAAGGGGAACTAGTCCTGTTTGATTCATCAGTTGAGAGTTCTCTTTGGACCACCAAAACAGGAACAGGATCTGTAGCTTCAGCTTCACTGCTTGACAATGGAAACCTTGTTCTAATGGACAAGGAGAAAAACATCATTTGGCAAAGTTTTGATACTCCATCTGATACACTTGTCCCAGGACAAAGTTTGTCTGTTAACAAAATGCTTCGTGCTGCAACCGCGAGCAAGAGTAGCAAGGACAGTTATTACACTCTTCACATGAATGCTTCAGGCCATTTGGAGCTACATTGGGAAAGTGGTGTTATCTACTGGACAAGTGAAAACCACCACCACACTTCTGCTTTAAATCTAAGTGCTTTCGTCACAACCGGTGGAGCTCTAGAAATTCGAGAGCATCGAAGCTTGGAGCCTGTTTGGTCTGCATTTGGAGATGACCACAATGATGATTCTGTGAAATACAGGTATCTCCGGCTCAATGTTGATGGCAATCTCCGGTTATATTCGTGGATTGAGAGTTTAGCATCATGGAGATCGGCCTGGCAGGCTGTTGAGAATCAGTGTAAGGTCTTTGCAACTTGTGGTCTGCTTGGTGTCTGTGTGTTCAACGCCTCAGGTTCTGCTGAATGCAAATGTCCTTTTGAGGTAACCGGGGGTAACAAATGTTTGGTTCCATATGAAGGGGAGTGTGAATTTGGCTCCAATATGATAGCATATAAGAACACACATCTATATGCATTTTACCCTCCTGATAATTCTTTTATTACAAGTAGTATGCAGCATTGTGAACAATTGTGCCTCAATGATACTCAATGCACAGTTGCAACCTTTTCCAATGATGGAACAACTCCACAATGCTCAATTAAGAAAACTGGCTATGTCACAGGTTATTCTGATCCATCTGTAAGCTCAATATCCTTTGTTAAGAGATGTTCAGGTCCATTTGCTGTAAATCCAGTTATCACCAAGTCTTCTACTCCTTCAAAACCACCACCTCGGCTCTGTGTTCGTTGCCTAATAGGAGCTTCCACAGGCACATTTTTCATCCTTGTTATTCTCCAATTGGGAATTGTGTTCTACATCTACAGAAGAAAAAAATCTGGCAGGGAGAACAAGTCCACTTCAGCTTTGGCAGGCACAAACTCAAAGGGTTTGATTGTGATGTCCTTCTCAGAAATCAAGAGCCTCACGGGGGATTTCAAGAATCAAATAGGACCAAAGGTGTTCAAGGGTTGTTTGCTACCAAACAACAATCATCCAGTCGTGGTTAAAGACTTGAACGCGTCCATAGAGGAAAGGAAGTTCCGAAGTGCTGTTGTGAAGATGGGCTGCATCCACCACAAGAACCTTGTGAAACTGGAGGGCTATTGTTGTGAGTTTGATCACAGGCTTTTGGTGTATGAATATTGCAAAAAGGGTTCAGTGGAGAAGTACATAGACAATGATGCTCTCTGCAGGATGCTAACATGGAGAAAGAGAGTTGAGATATGCTCAAGTGTTGCAAAGGCCATATGCTATTTGCACTCAGGGTGCAGGGAGTTCATAAGCCATGGAAACTTGAAATGTGAAAATGTTATGTTGGATGAAAACTTGGAGGCCAAGGTAACTGAATTTGGGTTTGCTATTGCAGATGGCAAGGCAACATACTGTGGCTTTTCAGCTGAGAAGGATGTGGAGGATTTTGGCAAGCTAGTTCTAACCTTGTTAACTGGTTCTCGTGATCACCACGACATTGAGCTTTGCCAATGGACTTATAAAGAATGGATGGAAGAGAGGGTGGTTAATGTGGTTGATAAGAGAATGGAAGGGTGTTATAATTCAGAAGAACTCGACCGTACTTTAAGAATCGCATTTTGGTGCCTTCAGATGGACGAACGTAGGAGGCCTTCCATGGGGGAGGTTGTGAGAGTCCTTGATGGAACGTTGAGTGTCGATCCCCCGCCACCTCCTTTCGCCTTTCGGAGGCCCTTGCAGGTAGATTATTCAGAAGAAAATGTTTCAGAATTAGAAGTGTAG 2304 0.4293 MLRSLFLLCIFIGFLLYSVVGAEIPLGSKLSVVGNDYWVSSNGDFAIGFFNISDQPNQFSVGIRFNSKSIPHSQQTVIWVAGSGLKVGNKSYFELTHEGELVLFDSSVESSLWTTKTGTGSVASASLLDNGNLVLMDKEKNIIWQSFDTPSDTLVPGQSLSVNKMLRAATASKSSKDSYYTLHMNASGHLELHWESGVIYWTSENHHHTSALNLSAFVTTGGALEIREHRSLEPVWSAFGDDHNDDSVKYRYLRLNVDGNLRLYSWIESLASWRSAWQAVENQCKVFATCGLLGVCVFNASGSAECKCPFEVTGGNKCLVPYEGECEFGSNMIAYKNTHLYAFYPPDNSFITSSMQHCEQLCLNDTQCTVATFSNDGTTPQCSIKKTGYVTGYSDPSVSSISFVKRCSGPFAVNPVITKSSTPSKPPPRLCVRCLIGASTGTFFILVILQLGIVFYIYRRKKSGRENKSTSALAGTNSKGLIVMSFSEIKSLTGDFKNQIGPKVFKGCLLPNNNHPVVVKDLNASIEERKFRSAVVKMGCIHHKNLVKLEGYCCEFDHRLLVYEYCKKGSVEKYIDNDALCRMLTWRKRVEICSSVAKAICYLHSGCREFISHGNLKCENVMLDENLEAKVTEFGFAIADGKATYCGFSAEKDVEDFGKLVLTLLTGSRDHHDIELCQWTYKEWMEERVVNVVDKRMEGCYNSEELDRTLRIAFWCLQMDERRRPSMGEVVRVLDGTLSVDPPPPPFAFRRPLQVDYSEENVSELEV 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1381 767 CDD B_lectin 39 150 IPR001480 -
Aed8g1381 767 SUPERFAMILY Protein kinase-like (PK-like) 482 734 IPR011009 -
Aed8g1381 767 Gene3D Phosphorylase Kinase; domain 1 457 565 - -
Aed8g1381 767 ProSiteProfiles Bulb-type lectin domain profile. 23 148 IPR001480 -
Aed8g1381 767 Pfam D-mannose binding lectin 76 174 IPR001480 -
Aed8g1381 767 Gene3D Transferase(Phosphotransferase) domain 1 642 742 - -
Aed8g1381 767 Gene3D Transferase(Phosphotransferase) domain 1 566 641 - -
Aed8g1381 767 Pfam Protein tyrosine and serine/threonine kinase 503 640 IPR001245 GO:0004672|GO:0006468
Aed8g1381 767 Gene3D - 150 290 - -
Aed8g1381 767 Pfam PAN domain 345 396 IPR003609 -
Aed8g1381 767 SMART blect_4 29 150 IPR001480 -
Aed8g1381 767 PIRSF SRK 643 766 IPR024171 GO:0004674
Aed8g1381 767 PIRSF SRK 1 645 IPR024171 GO:0004674
Aed8g1381 767 ProSiteProfiles PAN/Apple domain profile. 326 407 IPR003609 -
Aed8g1381 767 ProSiteProfiles Bulb-type lectin domain profile. 151 276 IPR001480 -
Aed8g1381 767 Pfam S-locus glycoprotein domain 245 308 IPR000858 GO:0048544
Aed8g1381 767 Gene3D - 20 149 IPR036426 -
Aed8g1381 767 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD3-1 5 765 - -
Aed8g1381 767 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 204 IPR036426 -
Aed8g1381 767 PANTHER OS07G0415500 PROTEIN 5 765 - -
Aed8g1381 767 SMART ntp_6 327 406 IPR003609 -
Aed8g1381 767 ProSiteProfiles Protein kinase domain profile. 468 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1381 767 SUPERFAMILY alpha-D-mannose-specific plant lectins 173 275 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1381 Aed-Chr8 18044172 18046475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1381 448 745 Receptor kinase-like Gene Family AT4G05200 28.358 4.15e-37 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aed8g1381 PK_Tyr_Ser-Thr 1.9e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1381 - - gmx:100812107 1321.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1381 8 18044172 18046475 Aed8g1381 8 18044172 18046475 ECH