Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1371 ATGGGTAACTGTTGCGCTGTGGCAATCGGAAAAAGAAAGAAGAAGCTTAACCCCTACGAGGACGGGTCGTCGGTAAAGAAGCTGGTGGTGCTGAAGGAGCCCACGGGCCGGGACATTGGGCTGCGGTACGAGCTGGGCCGGGAGCTGGGCCGGGGCGAGTTTGGCGTGACGTACCTGTGCCGCGACAAGGAGACAAAGGAGGAGTGGGCATGCAAGAGCATTTCAAAGAAGAAGCTGAGAACCGCTATTGACATAGAGGATGTGAGGAGGGAGGTGGAGATCATGAAGCACTTGCCTAGACACCCCAACGTCGTGGCACTGAAGGACACGTACGAGGACGACAACGCCGTCCACCTCGTCATGGAGCTCTGCGAGGGCGGCGAGCTCTTTGACCGCATTGTCGCACGCGGCCACTATACGGAGCGCGCCTCCGCCTGCGTCACCAGAACCATCGTCGAAGTCGTGCAGATACTAAAACAATGTTGTGATATTTTTGGTGCTAAATTAACTGATGCTTGTAATTTTATGTTATGTGAAAGATTTAATGAGATAGTTGGAAGTCCATATTACATGGCTCCTGAAGTTTTAAAGCGTAATTATGGCCCTGAAGTAGATATTTGGAGTGCTGGAGTTATTCTCTACATCTTACTTTGTGAAACTGAACAGGGAGTTGCTCATGCAATTATTCGATCTGTTGTTGATTTTAAAAGGGATCCATGGTCAAAGGTTTCTGATAATGCAAAAGATCTTGTGAAGAAGATGCTTAATCCTGACGCTAAGGCCCGTCTTACTGCACAAGAAGTGTTAGAGTTTTTGTCTATAGAAGAAGTTGCTGGAATAAAAGAGGGATTTGAGTTGATGGATACAAGCAATAAAGGCAAGGTTAACATTGATGAGCTGAGAGTAGGGTTGCATAAACTAGGTCACCAAATTCCTGATGGGGATGTCCAAGCACTTATGGAAGCTGGTGATCTAGACAACGATGGGTACCTAGATTATGGCGAGTTTGTTGCCATTTCTCTTCATCTGAAGAAGATAGACAATGATGAGCACCTTCGCAAAGCCTTCCAATTTTTCGATGAGAACCAAAGTGGATATATTGAAGTTGAGGACTTACATAATGCCTTAGCCGATGAGGATGGAAGAATAAGTTATGAGGAGTTTGCTGCAATGATGAAAGCAGGCACAGATTGGAGGAAAGCATCAAGGCAGTATTCAAGAGAGAGGTTCTCTAGTCTAAGCCAGAAATTGATGAAAGACGGGTCTTTTAATTTGAAAAATGATGAAATTAGATAG 1296 0.4576 MGNCCAVAIGKRKKKLNPYEDGSSVKKLVVLKEPTGRDIGLRYELGRELGRGEFGVTYLCRDKETKEEWACKSISKKKLRTAIDIEDVRREVEIMKHLPRHPNVVALKDTYEDDNAVHLVMELCEGGELFDRIVARGHYTERASACVTRTIVEVVQILKQCCDIFGAKLTDACNFMLCERFNEIVGSPYYMAPEVLKRNYGPEVDIWSAGVILYILLCETEQGVAHAIIRSVVDFKRDPWSKVSDNAKDLVKKMLNPDAKARLTAQEVLEFLSIEEVAGIKEGFELMDTSNKGKVNIDELRVGLHKLGHQIPDGDVQALMEAGDLDNDGYLDYGEFVAISLHLKKIDNDEHLRKAFQFFDENQSGYIEVEDLHNALADEDGRISYEEFAAMMKAGTDWRKASRQYSRERFSSLSQKLMKDGSFNLKNDEIR 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1371 431 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 32-LIKE 11 159 - -
Aed8g1371 431 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 32-LIKE 269 409 - -
Aed8g1371 431 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 32-LIKE 175 270 - -
Aed8g1371 431 ProSiteProfiles EF-hand calcium-binding domain profile. 275 310 IPR002048 GO:0005509
Aed8g1371 431 ProSiteProfiles EF-hand calcium-binding domain profile. 311 346 IPR002048 GO:0005509
Aed8g1371 431 ProSitePatterns EF-hand calcium-binding domain. 360 372 IPR018247 -
Aed8g1371 431 PANTHER SERINE/THREONINE-PROTEIN KINASE 11 159 - -
Aed8g1371 431 PANTHER SERINE/THREONINE-PROTEIN KINASE 269 409 - -
Aed8g1371 431 Gene3D Transferase(Phosphotransferase) domain 1 129 278 - -
Aed8g1371 431 ProSiteProfiles EF-hand calcium-binding domain profile. 347 382 IPR002048 GO:0005509
Aed8g1371 431 CDD EFh 351 393 IPR002048 GO:0005509
Aed8g1371 431 ProSitePatterns Protein kinases ATP-binding region signature. 49 72 IPR017441 GO:0005524
Aed8g1371 431 Gene3D Phosphorylase Kinase; domain 1 45 128 - -
Aed8g1371 431 PANTHER SERINE/THREONINE-PROTEIN KINASE 175 270 - -
Aed8g1371 431 Pfam EF-hand domain pair 293 339 IPR002048 GO:0005509
Aed8g1371 431 Pfam EF hand 378 392 IPR002048 GO:0005509
Aed8g1371 431 Pfam EF hand 352 372 IPR002048 GO:0005509
Aed8g1371 431 ProSiteProfiles Protein kinase domain profile. 43 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1371 431 SUPERFAMILY Protein kinase-like (PK-like) 42 274 IPR011009 -
Aed8g1371 431 Gene3D - 340 409 - -
Aed8g1371 431 SUPERFAMILY EF-hand 268 416 IPR011992 -
Aed8g1371 431 Pfam Protein kinase domain 43 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1371 431 Pfam Protein kinase domain 176 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1371 431 Gene3D - 279 339 - -
Aed8g1371 431 SMART efh_1 315 343 IPR002048 GO:0005509
Aed8g1371 431 SMART efh_1 351 379 IPR002048 GO:0005509
Aed8g1371 431 SMART efh_1 279 307 IPR002048 GO:0005509
Aed8g1371 431 ProSitePatterns EF-hand calcium-binding domain. 324 336 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1371 Aed-Chr8 17843482 17851541 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1371 1 428 EF-hand Containing Proteins AT5G19450 59.398 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aed8g1371 Pkinase 2.4e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1371 K13412 - gmx:100815320 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1371 8 17843482 17851541 Aed8g1371 8 17843482 17851541 ECH