Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1368 ATGTGTTCTTGCACCTCAACCTTGACTCAGGTATTTGATTCTTCTTCTTCTTCTTCCACCAAGAAGAGGAAACTCTCCAACAATGTGCATGCTGCTTCAAGAAAGAAGAAGAAGTTGAAGAATGATGATGATGAGGTTTGGAAGATCAAGAAAGTGCTGAAAGAGAGTGATGTTGGGAACATGAGCAGGTTAGTGCTGGGAAGAGACATGGCTGAGGAGTTTGTGCTTCCTGTGTTGGGGGCTGATGCTGCTGAGATTGATAGAGGAGTTGCTGTTAAGGTTTGGGATGTTGACACAAAGTCTATGCACTCTCTTGTTTTCAAGAGATGGGTTTCTTCTAAAAGTTATGTCTTCATTGGCAACTGGGGTAAAGAATTTGTTGCAAGAAGAGGGTTAAAGAAAGGAACTGAGATTGGTCTTCAATGGAATGCATCCAAGAATGGCTTTGATTTCTCTACTATAGAGTTAATGAGAATTAATAAAATTAAGAAGCTCTTATTTTGCATTGCTGATCGGTATGCTGCATGA 528 0.4034 MCSCTSTLTQVFDSSSSSSTKKRKLSNNVHAASRKKKKLKNDDDEVWKIKKVLKESDVGNMSRLVLGRDMAEEFVLPVLGADAAEIDRGVAVKVWDVDTKSMHSLVFKRWVSSKSYVFIGNWGKEFVARRGLKKGTEIGLQWNASKNGFDFSTIELMRINKIKKLLFCIADRYAA 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1368 175 CDD B3_DNA 47 152 IPR003340 GO:0003677
Aed8g1368 175 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 14 153 - -
Aed8g1368 175 Coils Coil 22 42 - -
Aed8g1368 175 Gene3D - 33 155 IPR015300 -
Aed8g1368 175 SUPERFAMILY DNA-binding pseudobarrel domain 44 145 IPR015300 -
Aed8g1368 175 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 14 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1368 Aed-Chr8 17799504 17800981 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1368 31 135 B3 DNA Binding Superfamily AT3G24650 29.204 1.04e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1368 - - gmx:102663812 218.394