Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1352 ATGCAGTCTCCAGGAAAGTTATATGAAGAATTGGACGAGTTCTTCAATTACTTCGATATTTTTATTTCAATGCACCATCTGAAACGGTTGATGCCTACCTTTACTTCAATCAGTTCTGTAATTGAATCTTTAACTAACAGGAGATTTACTCATGGCCATCTAGCACAGTTGAAATTCATCTTGCTTGAGGCTATTGTTCTCAAGAAGCATATAGTGCCTGATGAATGGATGAGGTGTATGAAGTCGGATATTCACATTTCTCTGGACCCTGCAGTGGTGGAGGCTGATGCGAATTTGCCCCCTGAACGAGGGAGAGTGTCACTGAAGAAGGTGTTCCGGGAACGGCTAAGGGAGTTTTTGGAATCTCATCCTGAGGGTGATGAAATTCCAGAAGGTGAATTGCCTGAGCCATTCAATCGCCAAAAGAAAGAAAGTATTTCGGAATCTTGTCTCCCGACAAGATTGTCACACATGCGCTATAGTGACATCGAGGGGTCTTCTGGTGCTCCCCCTGCTACTCCAAGCAAAACCATTGACTACGCAGAAAACAAAGAGGGGTCTTTCAAGAGCATTGATGCCATGTCAACACCAGCAAGAAAAACAATTGAGTACGCAGAAAACAGAAATGGGTCTCTCAAGAGCATAGATGCCACGTCAACTCCGGCTAAACTTGTTTCTACTCCAATTAGGTTGATGAGTGCCACACCTGCCTTGCGTTCACCCAAAAAACCTTATATGAGCCCAGATGACAACTCTACCAGTTCTTTGAGCAAGTTAGCTAGGTGTCCACCTTGCTCAAGGTCATTGAAATTTGACACTCCAGTGAAGAATAAGGAGTCTCTGGATGGACATATTTCTGACAACCTCCAAGAAAATCTTATACAATCGATTAGAGAAAAGGAAAGAATGGCAATGGAGGAAAGAGACCCAGCTATCACACAAGAAGAGAAATGA 954 0.4319 MQSPGKLYEELDEFFNYFDIFISMHHLKRLMPTFTSISSVIESLTNRRFTHGHLAQLKFILLEAIVLKKHIVPDEWMRCMKSDIHISLDPAVVEADANLPPERGRVSLKKVFRERLREFLESHPEGDEIPEGELPEPFNRQKKESISESCLPTRLSHMRYSDIEGSSGAPPATPSKTIDYAENKEGSFKSIDAMSTPARKTIEYAENRNGSLKSIDATSTPAKLVSTPIRLMSATPALRSPKKPYMSPDDNSTSSLSKLARCPPCSRSLKFDTPVKNKESLDGHISDNLQENLIQSIREKERMAMEERDPAITQEEK 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1352 317 Pfam DNA replication factor CDT1 like 8 154 IPR014939 -
Aed8g1352 317 MobiDBLite consensus disorder prediction 123 143 - -
Aed8g1352 317 MobiDBLite consensus disorder prediction 238 272 - -
Aed8g1352 317 SMART CDT1_2 4 136 IPR014939 -
Aed8g1352 317 MobiDBLite consensus disorder prediction 246 261 - -
Aed8g1352 317 MobiDBLite consensus disorder prediction 123 149 - -
Aed8g1352 317 SUPERFAMILY "Winged helix" DNA-binding domain 8 138 IPR036390 -
Aed8g1352 317 PANTHER DNA REPLICATION FACTOR CDT1 8 316 IPR045173 GO:0003677|GO:0030174|GO:0071163
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1352 Aed-Chr8 17473879 17476601 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1352 8 313 Core DNA Replication Machinery Family AT2G31270 34.000 1.53e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1352 K10727 - gmx:100778818 286.574