Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1345 ATGTGTTCTTGCACCTCAACCTTGACTCAGGTATTTGATTCTTCTTCTTCTTCTTCCACCAAGAAGAGGAAACTCTCCAACGATGTGCATGCTGCTTCAAGAAAGAAGAAGAAGTTGAAGAATGATGATGATGAGGTTTGGAAGATCAAGAAAGTGCTGAAAGAGAGTGATGTTGGGAACATGAGCAGGTTAGTGCTGGGAAGAGACATGGCTAAGGAGTTTGTGCTTCCTGTGTTGGGGGCTGATGCTGCTGAGATTGATAGAGGAGTTGCTGTTAAGGTTTGGGATGTTGACACAAAGTCCATGCACTCTCTTGTTTTCAAGAGATGGGTTTCTTCTAAAAGTTATGTCTTCATTGGCAACTGGGGTAAAGAATTTGTTGCAAGAAGAGGGTTAAAGAAAGGAACTGAGATTGGTCTTCAATGGAATACATCCAAGAATGGCTTTGATTTCTCTATAAAAGATATTATTCTTAAGATATTTGAATTTTGTGTTGCACTTTACCTCCATAAATGGACTAGAGTTAATGAGAATTAA 537 0.3929 MCSCTSTLTQVFDSSSSSSTKKRKLSNDVHAASRKKKKLKNDDDEVWKIKKVLKESDVGNMSRLVLGRDMAKEFVLPVLGADAAEIDRGVAVKVWDVDTKSMHSLVFKRWVSSKSYVFIGNWGKEFVARRGLKKGTEIGLQWNTSKNGFDFSIKDIILKIFEFCVALYLHKWTRVNEN 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1345 178 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 14 153 - -
Aed8g1345 178 Coils Coil 22 42 - -
Aed8g1345 178 Gene3D - 35 155 IPR015300 -
Aed8g1345 178 SUPERFAMILY DNA-binding pseudobarrel domain 44 145 IPR015300 -
Aed8g1345 178 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 14 153 - -
Aed8g1345 178 CDD B3_DNA 47 155 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1345 Aed-Chr8 17400126 17401545 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1345 14 135 B3 DNA Binding Superfamily AT3G24650 27.869 1.85e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1345 - - gmx:102663812 217.624