Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1343 ATGTCAGAAATTCTCAACAAAATTGCAGCCTCAGAAAACCAGAAATTCGAAGTCACATTCAGTAAGAAAAGTGTTGTAAAAGCACTGATCAACCCTTCACTAGAGCCATTTTCAATCATAACTCTCTCAAATCTAGACCTTCTCTCAGGTCGTTTTCCTGTTACATATTTATATTTCTACCACAAACCAGAATCAGAAAACAACTTCAAAGCCTTTGTTGAAGCTCTCAAGACCTCTCTAGCACAAACACTAGATCACTATTACCCCTTTGCTGGCCAAATTGTCCAAAACCCCAAAACCAATGAGCCTGAAATCATTTGTGACAACAACGGTGCTCTAGTCATAGAGGCTCACACAAACACCCCATTGAAAAGATTAGATTTTTACAATCTCAATGAAACTCTTGAAGAAAAGGTAGTTTCCAATGAGCCAAATTTCCCTTTACAAATTCAGGTGACTGAGTACACCTGTGGAGGCATTTCCATAGCGTTCACTTTTGATCATGCATTAGGCGATGCCACTTCATTTGGCAAGTTCATTGCTTCATGGTGTGAAATAGCTCAAAAGAGACCACTCTCATGCATACCGGATCATACTCGACACCTTCGCGCGCGTCCTTCTCCGAAATACCAACCATCCTTGGATCAAACCTTCATCAGGTGCACCATGGAGGAGATACAGAACATGCCAATAAAGCATCATGTCTTGCTTAAACGCCTCTATCACATCGAAGCATCAAGCATCAAAATGTTGCAAAAACTTGCTTCTGAGAACGGGGTCGAGAGGACAAAGATTGAGGCTTTTTCTGCTTATGTATGGAAGACAATGATTGGTGCAATAGACCAAAGGCATGTTAAGAAGTGCAAGATGGGGTGGTTGGTAGATGGAAGAGAAAGAATTGAAAGAGGAAACAAGAGTTTTTTTATGTCAAATTACATTGGTAATGTTTTGTCTTTGGCTTTTGGGGAGTTAAGAGTTGAAGAGTTGAAGGAAAACTCTATATCAAACATTGCAAACAAAGTGCATGAGGCAATTTCAAAGGTGAACAATGAGGAACACTTTATGGACTTGATTGATTGGATTGAGAGCCATAGGCCAGGTTTAATGCTAGCAAAGGCAGTATTGGGACAAGAAGAAGGAGCAACCCTAGTTGTGTCCTCAGGGCAGAGGTTTCCGGTCAAAGAAGTTGACTTTGGATTTGGGAGTCCCTTGTTGGGGACAGTTTACACTTCCATTAAAAGGGTTGGAGTTGGTTACATGAACCAGAGGATGAGTGCCAAGGGTGATGGCTCTTGGACTGTCTTGTATATTTTCTTGTCTTTCTCAAATCTACGAATTACGGACAGGACATAA 1353 0.4102 MSEILNKIAASENQKFEVTFSKKSVVKALINPSLEPFSIITLSNLDLLSGRFPVTYLYFYHKPESENNFKAFVEALKTSLAQTLDHYYPFAGQIVQNPKTNEPEIICDNNGALVIEAHTNTPLKRLDFYNLNETLEEKVVSNEPNFPLQIQVTEYTCGGISIAFTFDHALGDATSFGKFIASWCEIAQKRPLSCIPDHTRHLRARPSPKYQPSLDQTFIRCTMEEIQNMPIKHHVLLKRLYHIEASSIKMLQKLASENGVERTKIEAFSAYVWKTMIGAIDQRHVKKCKMGWLVDGRERIERGNKSFFMSNYIGNVLSLAFGELRVEELKENSISNIANKVHEAISKVNNEEHFMDLIDWIESHRPGLMLAKAVLGQEEGATLVVSSGQRFPVKEVDFGFGSPLLGTVYTSIKRVGVGYMNQRMSAKGDGSWTVLYIFLSFSNLRITDRT 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1343 450 Pfam Transferase family 17 435 - -
Aed8g1343 450 Gene3D - 226 440 IPR023213 -
Aed8g1343 450 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 40 437 - -
Aed8g1343 450 Gene3D - 15 214 IPR023213 -
Aed8g1343 450 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 40 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1343 Aed-Chr8 17342397 17344349 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1343 29 405 Monolignol Biosynthesis Gene Families AT5G48930 25.127 7.91e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1343 - - gmx:100795616 720.309