Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1331 ATGTCGTCGAGTTTTCTGAACCCGGAGGAGTTCGAACTGAGTTACAAGGATCGCTCCATCGAAGCGCTGAGCAAATGGAGATCCGCCGCGTGGCTCGTCAAGAACCCTCGCCGCCGCTTCCGCTGGGCCGCGGATCTCGCCAAACGCAAACACGCCGAGGAGAAACGCCTTAAATTGCAGAGCACAATTCGGAGCACAATTCGGACCGCTATCAATGTTCAAAAGGCAGCAGATCAATTTATCAGCGTTCTACCTCCAGCTGAATACAAGTTGTCAGAAAAGACAAGAGGAGCTGGTTTTGGTATTGAACCAGATGATATCGCATCATGTGTTCGAGGCCACGATTACAAGAACTATAAAAAAATTGGTCAGGTTGAAGGGATTATAGCGAAACTCGGTGCCTCAGTTGATGATGGTGTTAGTCAAGACAGTATAGATACCAGGCAAGAGATTTATGGAGTCAACCGTTATACTGAGAAACCTTCTAAAAGCTTCCTTATGTTTGTTTGGGAAGCACTGCATGACTTAACACTAATCATTCTCATAGTCTGTGCTATAGTTTCCATTGCTATAGGGCTTCCCACTGAAGGCTTTCCAAAAGGTGTTTATGATGGTCTGGGAATCATACTTAGTATATTCTTGGTGGTCATTGTTACTGCTATCAGTGACTACCAGCAATCCCTGCAGTTCAGGGATTTGGACAAGGAAAAGAAAAAGATCTCTGTTCACATCACGAGGGACAGAAAAAGACAGAAGGTCTCAATTTATGACTTGGTTGTGGGAGACATTGTTCATTTGTCAACTGGTGATCAAGTTCCAGCTGATGGAATTTTTATATCAGGATATTCTTTGGTAATTGATGAATCAAGTTTGACAGGTGAGAGCGATCCGGTAAATATAGATGAGAAACGACCTTTTCTTCTTTCAGGAACCAAAGTGCAAGATGGTCAGGGGAAGATGATAGTTACAACTGTTGGCATGAGGACTGAATGGGGAAAGTTGATGGAAACTCTAAGTGAGGGAGGAGAGGATGAAACTCCACTGCAGGTGAAACTGAATGGAGTTGCTACTGTTATTGGAAAAATTGGATTGACTTTTTCTGTGCTGACATTTGTGGTGTTGACAATAAGGTTTGTGGTTGAAAAAGCAGTGCGTGGCGAGTTCACTAGCTGGTCTTCAAATGATGCATTGAAGTTGTTGGACTACTTTGCTATTGCGGTAACAATAATAGTTGTTGCGATTCCTGAAGGATTGCCATTAGCTGTGACACTTAGTCTTGCTTTTGCAATGAAAAAGTTAATGAAGGATAAGGCACTTGTGAGACATCTTTCTGCCTGTGAGACTATGGGTTCAGCAACTTGCATCTGCACAGATAAAACAGGAACATTGACCACTAACCATATGGTGGTTAGTAAAATTTGGATATGTGGAAAGAGCAAGGAGGTTAACAGTAAAGAGAGTGTTGACAAACTGAAGACAGAGATATCTGAAGAAGTTTCAAGCATCCTTTTGCGGTCTATATTTCAAAATACTTCTTCCGAAGTAGTTAAGGACAAAGATGGAAAAACGACAATACTTGGAACACCAACAGAATCAGCATTATTGGAATTTGGCTTGCTTTCGGGTGGTGATTTTGAAGTGCAGCGTGAAACATATAAGATACTCAAGCTCGAGCCTTTCAATTCGGTCCGGAAGAAGATGTCTGTGATAGTAGGTCTTCCTGATGGAGGTGTCCAAGCTTTCTGCAAAGGTGCATCAGAAATAGTATTAAAAATGTGTGACAAAGTTATTGATCCTAATGGAGCAGTTGTTGATCTTTCTGATGAGCAGGCTAAGAATGTCTCTGACATTATAAATGGCTTTGCCTCCGAAGCTTTGAGGACTCTTTGTTTAGCTGTCAAAGATGTAAATGAAACTAAAGGGGAAATCAGCATCCCTGAAGATAGCTATACTCTGATAGCCATTGTGGGAATCAAGGATCCTGTGCGCCCTGGGGTTAGAGAAGCTGTTAAAACCTGTTTAGCTGCTGGAATAACGGTCCGTATGGTGACTGGTGATAACATAAATACAGCTAGGGCTATAGCTAAAGAATGTGGCATTCTTACAGAGGATGGTGTAGCAATCGAAGGACCCCACTTTCGGGACTTGTCTACAGAGCAAATGAAGAGTATTATACCTAGAATTCAGGTTATGGCGCGATCCTTACCTCTTGACAAGCATACCTTGGTAACCCATTTGAGGAATATGTTTGGTGAGGTTGTAGCTGTTACTGGTGATGGAACCAATGATGCTCCTGCACTGCATGAGTCAGACATTGGTCTTGCTATGGGCATAGCTGGAACTGAGGTTGCCAAAGAAAATGCTGATGTCATTATAATGGATGATAACTTCAATACTATTGTCAATGTGGCCAGATGGGGACGGGCCATATACATCAACATTCAAAAATTTGTGCAGTTTCAGTTAACTGTCAATATCTTGCTTTGGGTGAACTTGATTATGGATACTCTGGGTGCATTGGCTTTGGCCACTCAACCTCCCAATGATGGACTTATGCTAAGACCCCCAGTTGGAAGGACAACAAATTTTATCACCAAACCCATGTGGAGAAACATTTTTGGTCAAAGTTTGTATCAACTAATTGTCCTTGCGGTTCTCACTTTTGATGGGAAGAGGCTACTGAGAATTAATGGTCCAGATGCAACTGTAGAGCTCAACACTTTGATATTCAACTCCTTTGTGTTTTGCCAGTTCCTGGGAACATTTGCGAGCACTGTGCCTCTAAGCTGGCAATTCTGGGTGCTCAGCGTGATAATTGGAGCACTCAGCATGCCTATTTCTGCTATACTCAAATGCATCCCAGTTGAAAGAGGAGATGCTACAAAGCACCATAATGGTTATGAGGCACTGCCTTCTGGTCCCGAACTGGCGTAA 2934 0.4271 MSSSFLNPEEFELSYKDRSIEALSKWRSAAWLVKNPRRRFRWAADLAKRKHAEEKRLKLQSTIRSTIRTAINVQKAADQFISVLPPAEYKLSEKTRGAGFGIEPDDIASCVRGHDYKNYKKIGQVEGIIAKLGASVDDGVSQDSIDTRQEIYGVNRYTEKPSKSFLMFVWEALHDLTLIILIVCAIVSIAIGLPTEGFPKGVYDGLGIILSIFLVVIVTAISDYQQSLQFRDLDKEKKKISVHITRDRKRQKVSIYDLVVGDIVHLSTGDQVPADGIFISGYSLVIDESSLTGESDPVNIDEKRPFLLSGTKVQDGQGKMIVTTVGMRTEWGKLMETLSEGGEDETPLQVKLNGVATVIGKIGLTFSVLTFVVLTIRFVVEKAVRGEFTSWSSNDALKLLDYFAIAVTIIVVAIPEGLPLAVTLSLAFAMKKLMKDKALVRHLSACETMGSATCICTDKTGTLTTNHMVVSKIWICGKSKEVNSKESVDKLKTEISEEVSSILLRSIFQNTSSEVVKDKDGKTTILGTPTESALLEFGLLSGGDFEVQRETYKILKLEPFNSVRKKMSVIVGLPDGGVQAFCKGASEIVLKMCDKVIDPNGAVVDLSDEQAKNVSDIINGFASEALRTLCLAVKDVNETKGEISIPEDSYTLIAIVGIKDPVRPGVREAVKTCLAAGITVRMVTGDNINTARAIAKECGILTEDGVAIEGPHFRDLSTEQMKSIIPRIQVMARSLPLDKHTLVTHLRNMFGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFNTIVNVARWGRAIYINIQKFVQFQLTVNILLWVNLIMDTLGALALATQPPNDGLMLRPPVGRTTNFITKPMWRNIFGQSLYQLIVLAVLTFDGKRLLRINGPDATVELNTLIFNSFVFCQFLGTFASTVPLSWQFWVLSVIIGALSMPISAILKCIPVERGDATKHHNGYEALPSGPELA 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1331 977 SUPERFAMILY HAD-like 455 836 IPR036412 -
Aed8g1331 977 Gene3D - 126 317 - -
Aed8g1331 977 SUPERFAMILY Calcium ATPase, transduction domain A 241 337 IPR008250 -
Aed8g1331 977 SMART Cation_ATPase_N_a_2 121 193 IPR004014 -
Aed8g1331 977 PRINTS P-type cation-transporting ATPase superfamily signature 781 793 - -
Aed8g1331 977 PRINTS P-type cation-transporting ATPase superfamily signature 676 686 - -
Aed8g1331 977 PRINTS P-type cation-transporting ATPase superfamily signature 757 776 - -
Aed8g1331 977 PRINTS P-type cation-transporting ATPase superfamily signature 456 470 - -
Aed8g1331 977 PRINTS P-type cation-transporting ATPase superfamily signature 654 665 - -
Aed8g1331 977 PRINTS P-type cation-transporting ATPase superfamily signature 287 301 - -
Aed8g1331 977 PRINTS H+-transporting ATPase (proton pump) signature 614 632 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed8g1331 977 PRINTS H+-transporting ATPase (proton pump) signature 789 814 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed8g1331 977 PRINTS H+-transporting ATPase (proton pump) signature 757 773 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed8g1331 977 SUPERFAMILY Calcium ATPase, transmembrane domain M 123 955 IPR023298 -
Aed8g1331 977 Pfam Cation transporter/ATPase, N-terminus 124 188 IPR004014 -
Aed8g1331 977 Pfam Ca2+-ATPase N terminal autoinhibitory domain 9 50 IPR024750 GO:0005516
Aed8g1331 977 SFLD C1.7: P-type atpase like 438 810 - -
Aed8g1331 977 PANTHER CALCIUM-TRANSPORTING ATPASE 11 827 - -
Aed8g1331 977 Pfam E1-E2 ATPase 240 435 - -
Aed8g1331 977 Gene3D - 508 654 IPR023299 GO:0000166
Aed8g1331 977 PANTHER CATION TRANSPORTING ATPASE 917 962 - -
Aed8g1331 977 Pfam Cation transporting ATPase, C-terminus 822 923 IPR006068 -
Aed8g1331 977 PANTHER CALCIUM-TRANSPORTING ATPASE 827 918 - -
Aed8g1331 977 ProSitePatterns E1-E2 ATPases phosphorylation site. 458 464 IPR018303 -
Aed8g1331 977 SFLD p-type atpase 438 810 IPR044492 -
Aed8g1331 977 Gene3D - 18 82 - -
Aed8g1331 977 Gene3D - 318 471 - -
Aed8g1331 977 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 116 826 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Aed8g1331 977 PANTHER CALCIUM-TRANSPORTING ATPASE 917 962 - -
Aed8g1331 977 Pfam Cation transport ATPase (P-type) 512 596 - -
Aed8g1331 977 Gene3D - 826 896 - -
Aed8g1331 977 Gene3D - 655 802 IPR023214 -
Aed8g1331 977 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 462 666 IPR023299 GO:0000166
Aed8g1331 977 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 208 520 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed8g1331 977 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 551 702 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed8g1331 977 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 722 833 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed8g1331 977 CDD P-type_ATPase_Ca_PMCA-like 145 868 - -
Aed8g1331 977 PANTHER CATION TRANSPORTING ATPASE 11 827 - -
Aed8g1331 977 PANTHER CATION TRANSPORTING ATPASE 827 918 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1331 Aed-Chr8 17033909 17042763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1331 67 974 Primary Pumps ATPases AT3G57330 66.770 0.0 1313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1331 K01537 - gmx:100785768 1726.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0469 4 3534229 3545665 Aed8g1331 8 17033909 17042763 PCT