Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1307 ATGGCGGAGTACGACCTAACCCCGCGGATGGCGCCGAATCTGGACAGGCATCTGGTGTTCCCTCTGCTGGAGTTTCTCCAGGAGCGCCAGCTGTACGACGACGACCACATCCTGAAGGCGAAGATTGACCTTCTTAACAACACCAACATGGTCGACTACGCCATGGACATCCACAAGAGCCTCTACCACACCGAGGACGTTCCCGCCGACATGGTCGAGCGCCGCGCCGAGGTCGTCGCCCGCCTCAAGTCCCTCGAGGAGGGCGCCGCGCCGCTGGTCGCATTCCTCCAGAACGCGGCCGCCGTGCAGGAGCTCCGCGCCGACAAGCAATACAATCTCCAGATGCTCAATGACCGTTATCAGAATTTTGCATCACCTTTGAACCAGGTGCAAAGCAGAATATGGCTGATGCATTGGAGTTTGTTCATCTTTTTTAACCATGACAATGGGAGGACACAAATAATTGATCTGTTCAATCAGGACAAGTATCTAAATGCTATCCAAACTAGTGCTCCACACCTTCTACGATACTTGGCCACCGCATTCATTGTCAACAAGAGGAGGAGGCCTCAATTCAAAGATTTTATTAAAGTTATTCAACAAGAGCAGCATTCATATAAGGACCCCATCACTGAGTTTTTGGCTTGTGTTTATGTCAACTATGACTTTGATGGGGCACAAAAGAAGATGAGGGAATGTGAAGAAGTGTTTGTAACTTATGTTTGCTGTTTGTATTCTATGACTGTTGTTTGTCCTTTGGAGCCAGATTTTGGCCACTCTTCAGTGCTTGCTGAGAAGTTGAATTTGAATTATGAGGAGGCTGAGAGATGGATTGTTAATCTCATCCGTAGCTCAAAGCTTGATGCCAAAATTGACTCCGAAACTGGAACAGTTATCATGGAACCTAATCATCCTAATGTGTATGAGCAGCTGATAGACCATACCAAGGCGCTTAACGGGCGCACTTACAAGTTGGTCAGTCAACTTCTGGAACACGCGCAAGCTCAAACCGCCCGGTAA 1020 0.4863 MAEYDLTPRMAPNLDRHLVFPLLEFLQERQLYDDDHILKAKIDLLNNTNMVDYAMDIHKSLYHTEDVPADMVERRAEVVARLKSLEEGAAPLVAFLQNAAAVQELRADKQYNLQMLNDRYQNFASPLNQVQSRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTSAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQHSYKDPITEFLACVYVNYDFDGAQKKMRECEEVFVTYVCCLYSMTVVCPLEPDFGHSSVLAEKLNLNYEEAERWIVNLIRSSKLDAKIDSETGTVIMEPNHPNVYEQLIDHTKALNGRTYKLVSQLLEHAQAQTAR 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1307 339 SMART eIF3_N_2 5 124 IPR019010 -
Aed8g1307 339 Hamap Eukaryotic translation initiation factor 3 subunit E [EIF3E]. 2 331 IPR016650 GO:0003743|GO:0005737|GO:0005852
Aed8g1307 339 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 1 121 IPR016650 GO:0003743|GO:0005737|GO:0005852
Aed8g1307 339 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 121 337 IPR016650 GO:0003743|GO:0005737|GO:0005852
Aed8g1307 339 PIRSF Transl_init_eIF3e 1 122 IPR016650 GO:0003743|GO:0005737|GO:0005852
Aed8g1307 339 PIRSF Transl_init_eIF3e 260 339 IPR016650 GO:0003743|GO:0005737|GO:0005852
Aed8g1307 339 PIRSF Transl_init_eIF3e 112 241 IPR016650 GO:0003743|GO:0005737|GO:0005852
Aed8g1307 339 Pfam eIF3 subunit 6 N terminal domain 5 121 IPR019010 -
Aed8g1307 339 ProSiteProfiles PCI domain profile. 143 305 IPR000717 -
Aed8g1307 339 Pfam PCI domain 261 301 IPR000717 -
Aed8g1307 339 SUPERFAMILY "Winged helix" DNA-binding domain 261 305 IPR036390 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1307 121 339 Eukaryotic Initiation Factors Gene Family AT3G57290 71.784 1.44e-119 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1307 K03250 - gmx:100797748 447.973