Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1303 ATGTTATCTGAAGAATTTGGTTTGGATGGTGTCATAAATCTTCATGGCAAAGAGGAAGAGCTGAAGCCAAACAAATGGGGGTGGAGGATTTTTGGAAGGATTAAGCAGAAACAGAATGTAGTTAAGAGTAGACTCATTCCAACATTGGATAAGGCTAGGAAAGCATTAAGAGCATTGAAGGGAGTTATAAGACTTCAAGCCATAATTCGCGGTCAAGCCGTGAGACGACAAGTGTCAAACACTCTGCAGAATCTTCCCTCCAATGCAAGAAATCTGGTGGGAGTTCAAGAAAGAAGCAGCCACAGTGCTGAACAGATCCAGCAAAGTCCAAAGCAGAAGAAAAAGTTAGAAAAGAAGAAGGAACTAAAGGCCATAGTCAAAGAACATGGGAATGTAGCTTGCTCTCAAGAGAAGACATTGAAGCTATATGGTTTAGAAAACAAGAGGCCATGCTCAAAAGAGAACGCATGA 471 0.414 MLSEEFGLDGVINLHGKEEELKPNKWGWRIFGRIKQKQNVVKSRLIPTLDKARKALRALKGVIRLQAIIRGQAVRRQVSNTLQNLPSNARNLVGVQERSSHSAEQIQQSPKQKKKLEKKKELKAIVKEHGNVACSQEKTLKLYGLENKRPCSKENA 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1303 156 PANTHER IQ-DOMAIN 12 52 128 - -
Aed8g1303 156 ProSiteProfiles IQ motif profile. 60 87 IPR000048 GO:0005515
Aed8g1303 156 PANTHER IQ-DOMAIN 5-RELATED 52 128 - -
Aed8g1303 156 MobiDBLite consensus disorder prediction 94 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1303 Aed-Chr8 16217033 16219490 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1303 52 87 IQD Protein Family AT5G13460 69.444 8.80e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1303 - - gmx:100800767 87.0409