Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1277 ATGGCTACCCCTGTCGTTCGACGCATTTCAGAATGCTTCGTGAAACCACATGGTTTAACCGAAGTGCCAAACCAAATGTGTCACTTAACCCATTGGGACATTGTTATGTTGTCTATGCACTATATCCAGAAGGGTCTACTCTTCAAGAAGCCTGCACCACTTGTTGATCAACATGATTTCATAGAGAATCTGTTGAAGAAACTGAAACACTCTCTTTCTCTCACCCTCTCCCATTTCTATCCATTGGCTGGTCGCTTTGTAACCCAGAAATCCCAAGACCCTCCCTCTTATTCTGTTTTCGTTGATTGCAACAACAGTGATGGAGTCAAATTCATCTATGCAACTTTGGACCTGACCATTTCTGACATACTCTCTCCCGTTGATGTCCCACCCATTGTTCAGTCATTCTTTGACCATCATAAAGCAATCAACCATGATGGTCACACCATGCCGTTGTTGTCCATCCAAGTCACTGAACTAGTGGATGCTGTTTTCTTAGGTTGTTCCATGAATCACTCTGTCGGTGATGGCACTTCTTATTGGAACTTCTTTAACACATGGTCTGAGATATTTCAACATGGAAGTGAAGTTCCCAATATTTCACACCAACCCATTCACAATCGCTGGTTTCCAAAAGATTGCAATCCAGTGAATCCACCAATAAATCTTCCTTTCAAACATGAGGACGAGTTTATAAGCAGATTTGAAGCACCCATTCTGAGAGAGAGAGTCTTCCAGTTTTCAGCAAAGTCTATTGCAAAACTGAAATTAAAGGCCAACTCAGAGTCCAATACCACAAAAATCTCTTCATTCCAGTCACTATCAGCACATGTTTGGAGATGCATAACTCGTGCATGCTCCCTAGCATATGAGAAAAGAACAAGTTGCAGGTTAACCGCAAACAATCGATCAAGAATGGAACCACCTCTGCCTCATGAGTACTTCGGAAACTCAGTTCATAGGTTGAGTGCAGAAACAACAGTAGGGGAATTACTTGAGAATGATCTAGGATGGGCAGCATGGAAGTTGCACCTGGCTGTTACAAACCACAACGACAAAGTGGTGCTGCAATCACTCAAAGAGTGGTTAGTGTCTCCTTCAATCTATCATATTGGTCAGCCCATGGACCCTTACGTTGTGTTGATAAGTAGCTCACCGAGGTTCAACATGTATGGGAATGAGTTTGGAATGGGAAAAGCAGTGGCTGTTAGAAGTGGTTATGCCAACAAGTTTGAGGGGAAAGTCACATCATACCCAGGGAGTGAAGGAGGTGGAAGCATTGATTTGGAGGTTTGCCTTTTACCACATATAATGAGCGCTCTGGAATCAGACAAGGGCTTTATCAATGCACTTCCTGTTTAA 1362 0.4295 MATPVVRRISECFVKPHGLTEVPNQMCHLTHWDIVMLSMHYIQKGLLFKKPAPLVDQHDFIENLLKKLKHSLSLTLSHFYPLAGRFVTQKSQDPPSYSVFVDCNNSDGVKFIYATLDLTISDILSPVDVPPIVQSFFDHHKAINHDGHTMPLLSIQVTELVDAVFLGCSMNHSVGDGTSYWNFFNTWSEIFQHGSEVPNISHQPIHNRWFPKDCNPVNPPINLPFKHEDEFISRFEAPILRERVFQFSAKSIAKLKLKANSESNTTKISSFQSLSAHVWRCITRACSLAYEKRTSCRLTANNRSRMEPPLPHEYFGNSVHRLSAETTVGELLENDLGWAAWKLHLAVTNHNDKVVLQSLKEWLVSPSIYHIGQPMDPYVVLISSSPRFNMYGNEFGMGKAVAVRSGYANKFEGKVTSYPGSEGGGSIDLEVCLLPHIMSALESDKGFINALPV 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1277 453 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 451 - -
Aed8g1277 453 Gene3D - 8 221 IPR023213 -
Aed8g1277 453 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 451 - -
Aed8g1277 453 Gene3D - 230 443 IPR023213 -
Aed8g1277 453 Pfam Transferase family 14 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1277 Aed-Chr8 15588973 15590334 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1277 68 442 Monolignol Biosynthesis Gene Families AT5G48930 26.000 6.86e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1277 - - gmx:100787276 774.622