Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1257 ATGTCTACAACCTCAACACTTTCAAGTACTCCGCGAACAAAAAAACTATCACCATTTAGGATGTTGGAATGGATCACTATGTTGTTGGCAACAACCAAGTCAAAGAAACAAAACAAGCCAGCTACATTGCTTCACAAATCTATCATGAAAAACAATCAGGTAGTAGATAACTGCTATAGGACTGATCTAAAAAAGGCAGCTCTCGCAAGGTTAAGCGTTGTCAATAGGAGCCTTAGAGTTGCAAAGTCTGGTATGAAGAAGAGGAACAAACAAGCTGTGAAAAGTTGGGGAAATTAA 297 0.3872 MSTTSTLSSTPRTKKLSPFRMLEWITMLLATTKSKKQNKPATLLHKSIMKNNQVVDNCYRTDLKKAALARLSVVNRSLRVAKSGMKKRNKQAVKSWGN 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1257 98 PANTHER 60S RIBOSOMAL PROTEIN L28 16 94 IPR002672 GO:0003735|GO:0005840|GO:0006412
Aed8g1257 98 Gene3D - 4 94 - -
Aed8g1257 98 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 16 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1257 Aed-Chr8 14995169 14995798 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1257 27 92 Cytoplasmic Ribosomal Protein Gene Family AT2G19730 60.526 8.53e-23 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1257 K02903 - gmx:100500189 105.531