Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1181 ATGTACGGTGGTGGTGGTGGAGCTGAAGCTGAATCCGAATCTGAATCTGAGCGCAATAGAATGATGGTCGATGATGAGGAAGAAGAACAAGGCTCCTCGTTCAATTGCTGGGCCAAACAAACGGAGGAGAGCTATCAGTTACAGCTCGCACTCGCTCTTCGTCTTTCTTCTGGTTCCTCAGATCACCCTTCTTCTTCTTCTTTTTCTTCTGCAGCACAGACGCTTTCGCACCGGTTTTGGGTAAATGGTTGTTTGCAATACTCTGACAAAATTCTTGATGGCTTTTACTTAATTCACGGGATGGATACGTATACATGGACTATAAGTACTGATCTGCAGAATGTTGGTGTGATCCCATCACTTGAATCACTGATGTCACTTGAACCTGGTGATGACTTGTCAATTGTAGTGGTTTCTGTTGATAAATCTAGAGATCCTGGTTTGAGAGACCTGCAAAATAGGGTAGCAAGTCTTTCAAATAACTGGCTTACCACAAATGATGCAACTGAACAGCTTGCAAATATTGTTTGCAACAGGATGGGGGGAGGATCTTTAACTGAGGAAAATTTAGGTATACGCTGGAAGGAATGCATCCAACATCTTAAAAGTTGCCTGCTTTCTGTCATTCTTCCAATTGGAAGCTTACCCATCGGCCTTTGTGTCCATAGAGCATTTCTGTTTAAAGTGTTGGCTGACTTAATCAATCTACCATGCCGTATTGCAAAGGGCTGCAAGTATTGTAGGAAGGATGTGGGTGCTTCATGTATAGTGAAATTTGGTTCTGACAGGGAGTATATGATTGATTTAGTTGGAAGGCCTGGGGCAACATGCCGACCTGATTCTTCACTGAATTCTGCATCTTCAATGTTGGTCCCTTCACCATTATGTCATCCAAAGTTTAAGCCAGTTGAACCAGCTGAATATACAAAGACACTAGCCCAAATGTATTTCTTGGACAGTGAAGCACTGCATATTGTATTTGATACCACTTCAGGACCTGCAGTTAATCATAGTGGCAGAATGGATCTACAGCAAACTGAAGCTCTGGGTGCAAATTATGCTGGTGCAAGCAGCCATCTGATTGCTTTGATTTCTGGCGAAGAGGAATACGAGTCTTTCACTGAAGCAGACCAGTTGATACTGGATTATCCAAGTCATGAAGTTGATCATGACGAGGAGGATCTGGATATTCCATGGAGTGAACTTATTTTGAAGGAGAACATTGGGACAGGGTCATTTGGAACTGTCCTCCGTGCTGATTGGCGTGGTTCTGTCTCACTCATGAAGCGCTTCCGGCATCCAAATATTGTACTTTTGATGGGTGCAGTTATTCAGCCCCCAAAGTTATCAATAGTAACAGAATATTTATCAAGAGGCAGTTTGTATGAACTTCTACACATGCCCAATGTTGGATCATCACTTAGTGAGAAGCGTCGTCTAAGTATGGCTTACGATGTTGCAAGCGGAATGAATTATCTCCATCGAATGAGACCTCCTATTGTTCATAGAGATTTGAAGTCTCCAAATCTTTTGGTTGATGATTCATACACTGTTAAGGTATGCGACTTTGGCCTTTCACGTACAAAGGCAAACACGTTTCTTTCATCTAAAACCGCTGCCGGAACTCCTGAATGGATGGCACCCGAAGTCATTCGAGGAGAACTGTCAAATGAAAAATGTGATGTATTCAGCTTTGGTGTTGTTGCAGCTGTTGGTTTTATGGGCAAAAGGCTAGAGATTCCAATACACGTGAATCCTCAAGTGGCTGCCTTGATTGAGAGCTGCTGGTCAGGGGAACCCAAGAGACGGCCTTCTTTCTCCTCTATTATGAAATGTTTGCAGCAAATAATTGCTGATGCTATAGATTGA 1869 0.4291 MYGGGGGAEAESESESERNRMMVDDEEEEQGSSFNCWAKQTEESYQLQLALALRLSSGSSDHPSSSSFSSAAQTLSHRFWVNGCLQYSDKILDGFYLIHGMDTYTWTISTDLQNVGVIPSLESLMSLEPGDDLSIVVVSVDKSRDPGLRDLQNRVASLSNNWLTTNDATEQLANIVCNRMGGGSLTEENLGIRWKECIQHLKSCLLSVILPIGSLPIGLCVHRAFLFKVLADLINLPCRIAKGCKYCRKDVGASCIVKFGSDREYMIDLVGRPGATCRPDSSLNSASSMLVPSPLCHPKFKPVEPAEYTKTLAQMYFLDSEALHIVFDTTSGPAVNHSGRMDLQQTEALGANYAGASSHLIALISGEEEYESFTEADQLILDYPSHEVDHDEEDLDIPWSELILKENIGTGSFGTVLRADWRGSVSLMKRFRHPNIVLLMGAVIQPPKLSIVTEYLSRGSLYELLHMPNVGSSLSEKRRLSMAYDVASGMNYLHRMRPPIVHRDLKSPNLLVDDSYTVKVCDFGLSRTKANTFLSSKTAAGTPEWMAPEVIRGELSNEKCDVFSFGVVAAVGFMGKRLEIPIHVNPQVAALIESCWSGEPKRRPSFSSIMKCLQQIIADAID 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1181 622 Gene3D Phosphorylase Kinase; domain 1 425 460 - -
Aed8g1181 622 Pfam Ethylene-responsive protein kinase Le-CTR1 72 275 - -
Aed8g1181 622 CDD STKc_MAP3K-like 408 611 - -
Aed8g1181 622 ProSiteProfiles Protein kinase domain profile. 402 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1181 622 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 425 568 - -
Aed8g1181 622 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 379 424 - -
Aed8g1181 622 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 26 345 - -
Aed8g1181 622 MobiDBLite consensus disorder prediction 11 27 - -
Aed8g1181 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 500 512 IPR008271 GO:0004672|GO:0006468
Aed8g1181 622 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 379 424 - -
Aed8g1181 622 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 26 345 - -
Aed8g1181 622 SMART serkin_6 402 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1181 622 Gene3D Transferase(Phosphotransferase) domain 1 461 621 - -
Aed8g1181 622 SUPERFAMILY Protein kinase-like (PK-like) 393 617 IPR011009 -
Aed8g1181 622 Pfam Protein tyrosine and serine/threonine kinase 425 568 IPR001245 GO:0004672|GO:0006468
Aed8g1181 622 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 425 568 - -
Aed8g1181 622 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 567 620 - -
Aed8g1181 622 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 567 620 - -
Aed8g1181 622 MobiDBLite consensus disorder prediction 1 34 - -
Aed8g1181 622 Gene3D Phosphorylase Kinase; domain 1 382 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1181 Aed-Chr8 12545907 12557866 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1181 37 621 MAP Kinase Kinase Kinase AT5G03730 52.141 0.0 611
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Aed8g1181 EDR1 1.5e-71 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1181 K14510 - gmx:100807496 1044.65