Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1149 ATGAGAGAAGAGGATTCAAATTGGTTCTCAAGGTGGGAAGAGGAGCTCCCTCCCCCAGAGGAACTCATGCCTTTGTCACAAACCCTAATAAGCCCTGATCTTGCCATAGCCTTTGAAATAACAAACCCCTCACATCAACAACCACAGCAACATGGACAAGGACAGCAACAATTTCATCATCAACAGCAACCGCTTTCGTCGAATCCCGACGAGGAACCCGCGCGCACGCTGAAGCGGCCGCGGCTGGTGTGGACCCCACAGCTCCACAAGCGCTTCGTGGACGCTGTGGCCCACTTGGGGATCAAGAACGCTGTGCCCAAGACCATAATGCAGCTCATGAGCGTCGACGGATTGACCCGCGAGAACGTCGCGAGTCACCTCCAGAAGTACCGCCTCTACCTGAAGCGCATGCAGGGGCTGGCTGCCGGTGGCGGGGTCGGCGGAGTGGGCTCTGCCGATCCCGCCACTGATCACCTGTTTGCCAGCTCCCCTGTGCCGCCGCATTTCCTGCATCCGGCCGCTGTGCGGCCGGGTGCAGACCACTACTTGCCGTTTGTGTCGGTGCCAGCGTTGCAACAGCAACGCCACCACCAGCACTTGGCGGTGGCCGCGGCAGCTGGCCACCGCCATTTTGGCTCACCGCAGAACAGGCACTTTGAGCTCCCTGTTCTGTCGAGGATGGGAGCTCCGGTGCCGGGTTACGCAGCGGAGGAGGACGTGGATTCGGGAGGGAGGAAGGTAGAAGTGCAACAAAACACCAACAATGACAAAGTGAAGCCATAG 783 0.5913 MREEDSNWFSRWEEELPPPEELMPLSQTLISPDLAIAFEITNPSHQQPQQHGQGQQQFHHQQQPLSSNPDEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLAAGGGVGGVGSADPATDHLFASSPVPPHFLHPAAVRPGADHYLPFVSVPALQQQRHHQHLAVAAAAGHRHFGSPQNRHFELPVLSRMGAPVPGYAAEEDVDSGGRKVEVQQNTNNDKVKP 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1149 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 135 IPR017930 -
Aed8g1149 260 MobiDBLite consensus disorder prediction 246 260 - -
Aed8g1149 260 PANTHER HOMEODOMAIN-LIKE PROTEIN-RELATED 1 242 - -
Aed8g1149 260 MobiDBLite consensus disorder prediction 234 260 - -
Aed8g1149 260 MobiDBLite consensus disorder prediction 1 18 - -
Aed8g1149 260 MobiDBLite consensus disorder prediction 36 80 - -
Aed8g1149 260 Gene3D - 76 138 - -
Aed8g1149 260 SUPERFAMILY Homeodomain-like 76 136 IPR009057 -
Aed8g1149 260 MobiDBLite consensus disorder prediction 1 22 - -
Aed8g1149 260 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 80 132 IPR006447 GO:0003677
Aed8g1149 260 MobiDBLite consensus disorder prediction 40 70 - -
Aed8g1149 260 Pfam Myb-like DNA-binding domain 83 131 IPR001005 -
Aed8g1149 260 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 242 IPR044841 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1149 Aed-Chr8 11493713 11504587 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1149 1 231 G2-like Transcription Factor Family AT3G10760 54.122 3.39e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aed8g1149 Myb_DNA-binding 1.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1149 - - gmx:100816747 344.354