Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1116 ATGGACGACACAGGAGAAACCCTACTCAACCAAATCGACTGGGACTCGTTCCTCGACGAGTTACCGGAATTCAACGTCGATGATATTTTGCAAGACGGCGACGACACCACCGCCGTTCCTGTTACCGTTCTGTCAGAGATCGAGAACATGCTCATGACGCAGGCCGCCGAAAACGAAGACGACGCCGTTTTGCCCGAAACGCCTTCGTCGGAGTCGGAGGCAGAGTACTACAAGCTCTTCGAGGAGATTCTGGTGGAGCCCGAGAAAGGAGCGGAGAGTCAGAGTTCGAAAACAGAGTCTTTGGAAGGCTCTGTGAAAGACAAAACCAATGACTCTGCTCCCGATGAACCCATGTCCAAGAAATTAAAGAGGCAGTTGAGGAATAGGGATGCTGCAGTGAGATCGAGGCAGAGGAAGAAGTTGTATCAGAAAAACCTTGAGATGAAGAATAGGTACTTGGAAGGCGAATGCAAAAGACTGGGGCATTTGCTCCATTGCTGCTATGCTGAGAACAACGCTTTGCGGCTTTGCTTGCAATCACGTGGTGCATTTGGTGCTTCCATGACCATGCAGGAGTCTGCTGTGCTCTTGTTGGAACCTCTGCTGTTGGGTTCCCTGCTATGGTTCATGGGCATCATGTGCCATCTCAGCCTGCCCTTAATGCTGTGGCTCACAGCAGTACTTCCAAGAGAAAACATGGAACCGAAGGGCCTAAGAAGGGTAACTCAAAAAGGGCCAGAAAGTAAGATCTCTGAGTCTTTCCAGATGCAATCATTTGTAAAGAGTAGAAGATGCCAAGCTTCAAGAACAAAGATGAAATTCAATTTTATGGTGTTCTAA 840 0.4869 MDDTGETLLNQIDWDSFLDELPEFNVDDILQDGDDTTAVPVTVLSEIENMLMTQAAENEDDAVLPETPSSESEAEYYKLFEEILVEPEKGAESQSSKTESLEGSVKDKTNDSAPDEPMSKKLKRQLRNRDAAVRSRQRKKLYQKNLEMKNRYLEGECKRLGHLLHCCYAENNALRLCLQSRGAFGASMTMQESAVLLLEPLLLGSLLWFMGIMCHLSLPLMLWLTAVLPRENMEPKGLRRVTQKGPESKISESFQMQSFVKSRRCQASRTKMKFNFMVF 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1116 279 MobiDBLite consensus disorder prediction 88 136 - -
Aed8g1116 279 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 10 278 - -
Aed8g1116 279 CDD bZIP_HY5-like 121 171 - -
Aed8g1116 279 Pfam bZIP transcription factor 119 160 IPR004827 GO:0003700|GO:0006355
Aed8g1116 279 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 123 138 IPR004827 GO:0003700|GO:0006355
Aed8g1116 279 Gene3D - 119 176 - -
Aed8g1116 279 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 118 160 IPR004827 GO:0003700|GO:0006355
Aed8g1116 279 SUPERFAMILY Leucine zipper domain 120 176 IPR046347 GO:0003700|GO:0006355
Aed8g1116 279 PANTHER BZIP TRANSCRIPTION FACTOR 60 10 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1116 Aed-Chr8 10700374 10706432 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1116 18 279 bZIP Transcription Factor Family AT1G42990 36.458 3.11e-16 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed8g1116 bZIP_1 1.3e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1116 - - gmx:778132 407.527