Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1114 ATGGAGTGCAACAAAGATGAAGCCGTGAGGGCTAGGCAAATCGCCGAGGCCAGAATGCAGAGAGGTGAATTTGTGGAGGCACTCAAGTTTGCTAACAAGGCCAAAAAACTGTACCCTGATGTTGAAAGCATTACTCAGATTCTCACCATATGTGATGTCCACAATGCGGCACAGAAAAAACTCGCTGGCTCCGGCGACATGGACTGGTATGCAATTCTTCAGATTGAAAGGTTGGCGGCCGATGAAGCAGCTATAAGGAAACAATACAGGAGGCTCGCGCTGATGCTTCATCCTGATAAGAATAAGTTTGCAGGCGCGGAAGCTGCTTTCAAGTTGGTCGGGCAAGCCAACGGGGTCTTGAGTGACCAAGCGAAACGTTCTTTGTATGACACCAAGTTTGGAGCCTCTGTGGTGGGAGGTGCCTCTCACCATAACTCCTCAAATGGGAATGTGTTTGCCGCAAAACATAATCCAAATGCAATGAATAGTCAGAAGAGTTCTGATTTCTGCCATTTCTCATCAAATGGGAATGTGTTTGCTGCAAAATGGGATGCAAATGCAACAAATTGTCAGAAGAAGGCTGGACGGATGACATTCTGGACATCTTGTCAACATTGTGATAGAAGGTACCAGTACCGCATCACATTTGTAAATGCAAGCTTACTGTGTCAACAGTGTAAGATGCCGTTTAAAGCTCATGCTATTAGTTTTGGATACCAGGGTGTCTCACCACCAAATATCCCCAAAGAGGCTCCTCCAATGCATTGTCCCTCAAAACCAGCTTCGGAAAGCGCCGGTGGAAAAAACCCCCTTGGTAGAGAACATGCTGCTGGTACATTTGTGCAGTTCAATACTACATCTATGAAAAAATGTGCTGCTGGAGTTGGTAGTCATTTTGGAGGTGAAAAGAGTAAAGATGGCAACGTTCCTGCATCCCAAAGCCCATCACGGGCCACTAAAAATGTTGGAAGTACAAACGTAAGGCAGCCAGCACCAGATGCAACAAATTATCCGAAGAATTGTTCTGATTCTCACAGTGACTCAAATGGGAATGTGTTTGCTGCAAAACATGATGCAGATGAAGATGCAGCAAATTATCAGAAGAATAATTCTGATTCACACCAGTACTCGGATGGGAATGTGTTCACTGCAAAACACGATGCAAACGCAACAACAAATTACAAGAAGAATTCTTATCCGAACGCCACCAGTTCCAGCAACCAAGCTAAACGGAAGACATTCTGGACATCTTGCCAACATTGTCATGCTAAGTATGAGTACTGCATCCCGTTTGTTAATGCAACCTTAAGTTGCAAAGCATGTTTGAAGTCCTTTAAAGCTCGTCCAATTCCTGAGGTAAACATCATTAACGAGTCTCCAATGCATGATCCCAGCACAAAACAAGCCTCATCAGAAAGTACCGGTGGAGTACAACATGCTTGTAAGCAATCAAATCCTATTATGTCTATGAAAAGATGTGCTCCTGGCGTTGGTGAAGGTGCAAAGAGTAAAGATGGCTATGTTCATGCATCATCCAGAGGGATGAATTCATCACAAACCTCTAAAAATGTTGGAGGTAAAAGAGTAAGGCGTTCAGCAGCAGCACCAGATTCAGGAGAAATTCTCAAAGCTAGAATTGGGGAAGAGATGAACAATGATGCTAATGTTCGAGGAAATCATGTTGATCCTTCAAGAGTTAATGCAATGAGATCTGCCAGGAAAAAGCAACATGTTTCAAGTTAA 1743 0.4383 MECNKDEAVRARQIAEARMQRGEFVEALKFANKAKKLYPDVESITQILTICDVHNAAQKKLAGSGDMDWYAILQIERLAADEAAIRKQYRRLALMLHPDKNKFAGAEAAFKLVGQANGVLSDQAKRSLYDTKFGASVVGGASHHNSSNGNVFAAKHNPNAMNSQKSSDFCHFSSNGNVFAAKWDANATNCQKKAGRMTFWTSCQHCDRRYQYRITFVNASLLCQQCKMPFKAHAISFGYQGVSPPNIPKEAPPMHCPSKPASESAGGKNPLGREHAAGTFVQFNTTSMKKCAAGVGSHFGGEKSKDGNVPASQSPSRATKNVGSTNVRQPAPDATNYPKNCSDSHSDSNGNVFAAKHDADEDAANYQKNNSDSHQYSDGNVFTAKHDANATTNYKKNSYPNATSSSNQAKRKTFWTSCQHCHAKYEYCIPFVNATLSCKACLKSFKARPIPEVNIINESPMHDPSTKQASSESTGGVQHACKQSNPIMSMKRCAPGVGEGAKSKDGYVHASSRGMNSSQTSKNVGGKRVRRSAAAPDSGEILKARIGEEMNNDANVRGNHVDPSRVNAMRSARKKQHVSS 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1114 580 Pfam DnaJ domain 68 130 IPR001623 -
Aed8g1114 580 MobiDBLite consensus disorder prediction 307 351 - -
Aed8g1114 580 PANTHER - 383 579 - -
Aed8g1114 580 MobiDBLite consensus disorder prediction 510 526 - -
Aed8g1114 580 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 360 - -
Aed8g1114 580 PRINTS DnaJ domain signature 125 144 IPR001623 -
Aed8g1114 580 PRINTS DnaJ domain signature 89 104 IPR001623 -
Aed8g1114 580 PRINTS DnaJ domain signature 105 125 IPR001623 -
Aed8g1114 580 PRINTS DnaJ domain signature 70 88 IPR001623 -
Aed8g1114 580 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Aed8g1114 580 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 383 579 - -
Aed8g1114 580 MobiDBLite consensus disorder prediction 500 538 - -
Aed8g1114 580 CDD DnaJ 68 122 IPR001623 -
Aed8g1114 580 SUPERFAMILY Chaperone J-domain 65 131 IPR036869 -
Aed8g1114 580 MobiDBLite consensus disorder prediction 299 352 - -
Aed8g1114 580 Gene3D DnaJ domain 66 182 IPR036869 -
Aed8g1114 580 MobiDBLite consensus disorder prediction 551 580 - -
Aed8g1114 580 PANTHER - 1 360 - -
Aed8g1114 580 MobiDBLite consensus disorder prediction 246 273 - -
Aed8g1114 580 MobiDBLite consensus disorder prediction 459 480 - -
Aed8g1114 580 SMART dnaj_3 67 125 IPR001623 -
Aed8g1114 580 MobiDBLite consensus disorder prediction 456 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1114 Aed-Chr8 10665398 10667140 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1114 42 235 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 31.443 2.55e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1114 - - gmx:102662460 452.981