Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1104 ATGAAAAACTCTGCTTCGGAGAGTGGAATGTACATCATGGAGAGCGATGAAGATGTGGAGAAGGATCTGCAGAAAGACGAGAATGTTGATGACAACGATTCGGATTATTCGAATGATTCCGTTGAAGACCTATCAATGAGGAAACCCAGCAGTTACAGCATCGCATGGCCTCAGAGTTACAGGCAATCCATTGATCTGTATGGAAGTGTGCCATCACCAAACATTGGATTTCTTGGCACAACATCGCTGTCAAGACTAGGAAGTTCTTTTATTTCTTCATCTTTGACAAGAAGGCACACTGTTGAAATTATACCACCAGAGAAGAAATCACTCTTGCAACCCACAGAAGAGGAGAAACCAACAAGACACACCTTGTTTCCTTCCCAAATATCTAGAAAGTCTTCCATTAAGATTGGCAGGGTTTCTCATGAACCTCACATTCCTGGCCAATGCACTTTTGGACAAGCTGTGCTTAATGGCTTAAATGCCCTTTGTGGCATAGGAATCCTTTCAACCCCTTATGCTGTTAAAGAAGGTGGATGGATTGGTCTTTTTGTATTGTTAATGTATGCAATTTTTTCCTTTTATACTGGGTTGCTCTTGCGTTATTGCTTGGATAGCGCACCGGGTCTTGAGACATATCCTGACATTGGCCAAGCAGCTTTTGGCACTACTGGACGTGTCATCATTTCTGCTTGTTGCATTGAGTACATAATTGTGGAGAGTGACAACTTATCTACATTATTTCCAAATGCACACATTAATTTGGGTGGAATTGAACTGAATCCTCACGTTTTGTTTGGAATATTGACTGCTGTGGCTCTTCTTCCAACTGTTTGGCTACGTGACCTACGCATTCTCAGCTACGTCTCAGACAATGCTGACATTCATATCCCAGGAACAGCAGCAGCAACAACAAAAACATTCAATTTTGCAACTTTTCCTGTTGCAATAGGTCTCTATGGTTACTGCTATGCAGGGCATGCTGTGTTCCCAAACATCTACACTGCCATGGCTAATCGGAATCAATTCCCTGGAGTGCTCTTACAGCTATTATGGGTTACTCAGCGTTTGGAGAAGCAACACTCTCTCAGTTTGGTGATGTCATTGACTGGATCTTTACTCACAATGTTTGTTTCTTTGGTTCTTCCCGCTGCTTGTTTCTTAAGCATAAGGGGTGGCAGAATCACGCGCTTTCAGGTATCACTTTGTGTGACAATTATTGCAGTAGGTGTTGTATCAAGTTGTTTTGGATCATACTCAGCACTCTCCGAGATCATTGAAGAATTGTTTAAATCCTAG 1302 0.4217 MKNSASESGMYIMESDEDVEKDLQKDENVDDNDSDYSNDSVEDLSMRKPSSYSIAWPQSYRQSIDLYGSVPSPNIGFLGTTSLSRLGSSFISSSLTRRHTVEIIPPEKKSLLQPTEEEKPTRHTLFPSQISRKSSIKIGRVSHEPHIPGQCTFGQAVLNGLNALCGIGILSTPYAVKEGGWIGLFVLLMYAIFSFYTGLLLRYCLDSAPGLETYPDIGQAAFGTTGRVIISACCIEYIIVESDNLSTLFPNAHINLGGIELNPHVLFGILTAVALLPTVWLRDLRILSYVSDNADIHIPGTAAATTKTFNFATFPVAIGLYGYCYAGHAVFPNIYTAMANRNQFPGVLLQLLWVTQRLEKQHSLSLVMSLTGSLLTMFVSLVLPAACFLSIRGGRITRFQVSLCVTIIAVGVVSSCFGSYSALSEIIEELFKS 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1104 433 MobiDBLite consensus disorder prediction 1 48 - -
Aed8g1104 433 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 24 350 - -
Aed8g1104 433 PANTHER OS05G0424000 PROTEIN-RELATED 365 430 - -
Aed8g1104 433 Pfam Transmembrane amino acid transporter protein 151 291 IPR013057 -
Aed8g1104 433 PANTHER OS05G0424000 PROTEIN-RELATED 24 350 - -
Aed8g1104 433 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 365 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1104 Aed-Chr8 10477634 10486063 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1104 1 349 Amino Acid or Auxin Permease AAAP Family AT2G39130 52.699 2.77e-131 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1104 K15015 - gmx:100781123 570.081