Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1077 ATGGCCTTACAGAACATTGGTGCTGGTAACAGTGATGATGCCTTCTACAGGTATAAGATGCCTAGGATGATTACCAAAATTGAGGGCAGAGGTAATGGCATCAAAACTAATGTTGTCAATATGGTTGATATTGCCAAGGCATTGGCAAGGCCTGCGGCTTACACGACCAAGTATTTTGGTTGTGAACTTGGGGCCCAGTCAAAATTTGATGAGAAGACTGGCACTTCTCACGTCAATGGAGCACATGATACTGCTAAGCTTGCTGGCCTTCTTGAGATCTTCATTAAGAAATATGTCCAGTGTTATGGTTGTGGAAATCCTGAAACTGAGATCTTAATTACTAAGAGCCAAATGATCCAGCTGAAATGTGCTGCTTGTGGATTTGTGTCTGATGTTGATATGAGAGACAAGCTAACTACCTTCATTGTTAAGAACCCTCCAGAAGTTAAGAAAGGATCCAAAGACAAGAAGGCCATGAGGAGAGCTGAGAAGGAGAGACTGAAGGAAGGTGAATTGGCTGATGAGGAACTGAAGAAAGTGAAGAAAGAGGTTATTAAGAAGAAAGGAACTTCATCTTCTAAGGATGGGACCACAAAATCTACCACTTCAAGGAAAAAGGCAAATGGCTCCGATGAAGACTGTATATCTCCTCCTCACAGTCAAATTGACGAGAAGGATCAGGCTCATGTTGAAGAAGATGAAGATGATAATGATGATGTGCAATGGCTGACAGATACATCACTTGAGGCTGCTCGTCAACGAATCCAGGAACAGTTGAGTACTGTGACAGCTGATATGGTCATGCTCTCCACAGATGAACCAGAGAAGAAGAAGAAAGCAGCAACTAAGGATAGTGACAGCTCTGATAATGGTAACTCCATGACCTACCGGACACTGGTTGCAGAAGTCAAAGAAAATTTGAACAAAGGTGTTAAGGCAAAGGAGTTGCTGTCCCATCTGACTACACTTCCTGCATCGGCTCAGGAAAAGATGAGTGCTCTGTTTGAAGCCCTATTTGAGGGCATTGAGAAAGGGTTTGCAAAAGAAGCAATTAGGAAGAAGAGCTTCCTTGCTGCTGCAGTTGCCGAGGAAGAGGGTTTGCAGTTGTTACTGCTGCACGCAATTGAGGAATTTTCTTGTAAGTCCACTTTGAATGCACTGAAGGAGGTTGGCTTGGTTCTGAAGGCACTCTATGATGCTGGTGTGTTGGAGGAAGAGCACATTGTGCAGTGGTATCAAAAGGGACTGAAGGGCTGCAACAACAAGAACTCTCAGATTTGGAAAAATGCTCAACCTTTCATTGAATGGCTTCAGAATGCAGAATCAGAATCGGATGAAGAATAA 1344 0.4338 MALQNIGAGNSDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPAAYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTAKLAGLLEIFIKKYVQCYGCGNPETEILITKSQMIQLKCAACGFVSDVDMRDKLTTFIVKNPPEVKKGSKDKKAMRRAEKERLKEGELADEELKKVKKEVIKKKGTSSSKDGTTKSTTSRKKANGSDEDCISPPHSQIDEKDQAHVEEDEDDNDDVQWLTDTSLEAARQRIQEQLSTVTADMVMLSTDEPEKKKKAATKDSDSSDNGNSMTYRTLVAEVKENLNKGVKAKELLSHLTTLPASAQEKMSALFEALFEGIEKGFAKEAIRKKSFLAAAVAEEEGLQLLLLHAIEEFSCKSTLNALKEVGLVLKALYDAGVLEEEHIVQWYQKGLKGCNNKNSQIWKNAQPFIEWLQNAESESDEE 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1077 447 Gene3D - 105 145 - -
Aed8g1077 447 SMART 542_3 354 443 IPR003307 GO:0005515
Aed8g1077 447 Gene3D - 3 104 - -
Aed8g1077 447 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Aed8g1077 447 CDD W2_eIF5 299 445 - -
Aed8g1077 447 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED 1 447 - -
Aed8g1077 447 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Aed8g1077 447 Gene3D - 286 447 - -
Aed8g1077 447 MobiDBLite consensus disorder prediction 185 227 - -
Aed8g1077 447 MobiDBLite consensus disorder prediction 270 293 - -
Aed8g1077 447 SUPERFAMILY ARM repeat 296 441 IPR016024 -
Aed8g1077 447 ProSiteProfiles W2 domain profile. 286 447 IPR003307 GO:0005515
Aed8g1077 447 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Aed8g1077 447 MobiDBLite consensus disorder prediction 185 239 - -
Aed8g1077 447 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Aed8g1077 447 Pfam eIF4-gamma/eIF5/eIF2-epsilon 368 447 IPR003307 GO:0005515
Aed8g1077 447 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 447 IPR045196 GO:0003743|GO:0006413
Aed8g1077 447 MobiDBLite consensus disorder prediction 270 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1077 Aed-Chr8 10105078 10108233 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1077 1 440 Eukaryotic Initiation Factors Gene Family AT1G36730 64.444 9.09e-179 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1077 K03262 - gmx:100778073 677.937