Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1049 ATGGCTATGTTTGATCTCAATGTTGACATCAACCATGGTGGTGATGCTGACTCAATAAGGTGTGCTCATCAAAAGGGGTTGTTGCAGCTGCAAAGTTTCACTTTCCCACCTGAAATCTCAGATTCCAGAACCTCCAACAACTCCTCTGTGTGGAATCCAACAGAGGAAGACTCCTCAAACAACTCTTCTCCCTTGATCTTTGGCATAATCAAGAAAGAGAGCGACGAGTCAGAACAGGGTTGGTCTAAGGATAAAGCAACTGAAACCGTCGTTTCAGGTCTCAATCAACGTTGGAACGGCCCGGGATCGGAATTTGATGGTGCCACTGAAAGGGTCATCAAGAAGGAACAAAACACCATGATGATGATGACAACAAGGACCCTTTTCCCTGTGACTGCTGCTGCTGATAAAGGAGGGGCTGATTTCAAATTGGGGTTGTTGGGGAAGAAGACTCATCAGTGGCTGAACTTGTCATTTCCAGAGCCTGATGGACAACAAAATGGACTCAGAGCCTTACAGCAGAAGCTACCTCATGTGAGGAAGAACAGGAGAGGACCAAGGTCTCGAAGCTCGCAGTACCGTGGTGTCACCTTCTACCGCAGGACTGGTAGATGGGAGTCACATATTTGGGATTGTGGAAAGCAGGTCTATTTGGGTGGGTTTGACACTTCTCAAGCTGCTGCAAGAGCATATGATAGGGCTGCTATAAAGTTTCGTGGAGTAGATGCTGATATAAACTTTAGTTTGAGTGATTATGAGGAGGATTTGAAGCAGGAAGAGTTTGTGCTCTTACTTCGTCGACAAATCAATGGAAACTCAAGGAGGAGTTCAACATACAGAGATGCATTGGCCCTTCGCAAAGATGCTCTAGGAGAATCACGAATGGGACCATTTGTTGCCAAGACATTTTATCCCAAGCCATCCATTAAGTGTGATGATGGAAAATTGGAGGGCAGCTTTAAGCCAAGTTTCTATAAGGGAGAAATAATTGCAAATTCCAGCATAGCAGGGATTTCTCCATCTTGTAAAAAGTTGAAGAATAACGACTATGGTGGAGGATATTCTTATGGATGTATATCTTGTGAGATGCCAGATGAAAGAGGAACAATGGCCTTTCGGCTCTTAGTTTCTGGAGGCTTTTTTTGCCTAGTTCTTGATGGCTCCCTAGAGGGGCTCTGTGAGGAGATGAAGAGATGGAGGAATCTGAATTTTATAGAGGAAGAGGAGGTAGTTCTCAACATCCCCAAGGGGAAGGAACTATTGGAGGAGGCTGGGAATGGGGAGGCTTGGCTGGTAGGGAATATCTTGACTCAGGGATCTTTCGACAGCAAGGCTTTTATGATAACAATAGCATAA 1356 0.4506 MAMFDLNVDINHGGDADSIRCAHQKGLLQLQSFTFPPEISDSRTSNNSSVWNPTEEDSSNNSSPLIFGIIKKESDESEQGWSKDKATETVVSGLNQRWNGPGSEFDGATERVIKKEQNTMMMMTTRTLFPVTAAADKGGADFKLGLLGKKTHQWLNLSFPEPDGQQNGLRALQQKLPHVRKNRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTSQAAARAYDRAAIKFRGVDADINFSLSDYEEDLKQEEFVLLLRRQINGNSRRSSTYRDALALRKDALGESRMGPFVAKTFYPKPSIKCDDGKLEGSFKPSFYKGEIIANSSIAGISPSCKKLKNNDYGGGYSYGCISCEMPDERGTMAFRLLVSGGFFCLVLDGSLEGLCEEMKRWRNLNFIEEEEVVLNIPKGKELLEEAGNGEAWLVGNILTQGSFDSKAFMITIA 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1049 451 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 330 - -
Aed8g1049 451 CDD AP2 191 247 IPR001471 GO:0003700|GO:0006355
Aed8g1049 451 SMART rav1_2 192 254 IPR001471 GO:0003700|GO:0006355
Aed8g1049 451 Gene3D AP2/ERF domain 191 250 IPR036955 GO:0003700|GO:0006355
Aed8g1049 451 SUPERFAMILY DNA-binding domain 191 249 IPR016177 GO:0003677
Aed8g1049 451 Pfam AP2 domain 192 240 IPR001471 GO:0003700|GO:0006355
Aed8g1049 451 ProSiteProfiles AP2/ERF domain profile. 192 248 IPR001471 GO:0003700|GO:0006355
Aed8g1049 451 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SMZ-RELATED 3 330 - -
Aed8g1049 451 MobiDBLite consensus disorder prediction 37 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1049 Aed-Chr8 9711441 9720257 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1049 192 345 AP2-EREBP Transcription Factor Family AT4G36920 54.857 9.14e-43 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed8g1049 AP2 1.9e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1049 K09284 - gmx:100776138 475.707