Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1023 ATGGGGAAGGAAACAATGACATGCAATGATGATCAGAAAGGTAGTGAAGAGTGTTTGATGCTGTTTGGTGTGAACATTCTTGCAAAGAACCCTAGAAGAGATGATGGTGAGCCCACCAACAAATGTTCGAGTGTGGTAAACCTAAGTTGTTGCCATGATGATGGAGAGAAGGAGAATAATGGCAATAAAGAAAATTCTGAAGATGGGTATTTGTCTAATGCGCTTGCTCAACATGCCTTCCATGACAAGAAGAATAAGGGGAAACCATGGACTGAGAAAGAGCACAAGGATTTCCTGTGTGGTTTAAAGCACCTTGGAAAAGGTAGTTGGAAGGAAATTTCAAAGAACTATGTGAGAACAAAGACTCCCACCCAAGTTGCAAGTCATGCACAAAAGTATTTTCTCAGAATTGGTGCATTTGAGACAAGAAAACGTAGAAGAAGCCTCTTTGACATACCACTGGAAGAGGATGGAACTTCAAAAGTTCTGAGAGTTTCCCATTAA 504 0.4067 MGKETMTCNDDQKGSEECLMLFGVNILAKNPRRDDGEPTNKCSSVVNLSCCHDDGEKENNGNKENSEDGYLSNALAQHAFHDKKNKGKPWTEKEHKDFLCGLKHLGKGSWKEISKNYVRTKTPTQVASHAQKYFLRIGAFETRKRRRSLFDIPLEEDGTSKVLRVSH 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1023 167 ProSiteProfiles SANT domain profile. 90 138 IPR017884 -
Aed8g1023 167 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 86 136 IPR006447 GO:0003677
Aed8g1023 167 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 82 138 IPR017930 -
Aed8g1023 167 Gene3D - 88 139 - -
Aed8g1023 167 PANTHER TRANSCRIPTION FACTOR KUA1 2 157 - -
Aed8g1023 167 SMART sant 86 136 IPR001005 -
Aed8g1023 167 CDD SANT 89 134 IPR001005 -
Aed8g1023 167 Pfam Myb-like DNA-binding domain 88 134 IPR001005 -
Aed8g1023 167 SUPERFAMILY Homeodomain-like 84 137 IPR009057 -
Aed8g1023 167 ProSiteProfiles Myb-like domain profile. 82 134 IPR001005 -
Aed8g1023 167 PANTHER TRANSCRIPTION FACTOR KUA1 2 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1023 Aed-Chr8 9425682 9426975 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed8g1023 Myb_DNA-binding 4.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1023 - - gmx:106794827 245.743