Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1021 ATGGTCCATCTAAATGGAAGGGTGATTCGTGCACAATGTAAAGGTGTAGGGTCAGTGTTCAAGTCCTATACCCACTGTCGTAAGGGTACGCACAATAACTATTTGGAGAGTATGGTCACCATCGTTATCCACAATCTTGATCATAAAGCCCTGTTTGTCAAGTTTGTCCACTGTGGCAAGGTCACCCTCTTCTTCGACAATGTTTTCCCTTTCAGCTCCATTCCCAATGGTGTTGTCATCTGCAACATTAAGCACCATGTCGGAAATCGTGACATCTTCTCCACAACCTCCAATGATTATGATATTGATATCAACCACAACCTTGATGAGAATAAACTAGGGTCAAGCTTCCTATTGATGCGAAGAAGATTGAGCCAAGTGGCAACAACAAGGATGACAAAGGAAGCTAATGGGGTGTTGTGGACGGGGGAGGTTTGA 438 0.4406 MVHLNGRVIRAQCKGVGSVFKSYTHCRKGTHNNYLESMVTIVIHNLDHKALFVKFVHCGKVTLFFDNVFPFSSIPNGVVICNIKHHVGNRDIFSTTSNDYDIDINHNLDENKLGSSFLLMRRRLSQVATTRMTKEANGVLWTGEV 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1021 145 PANTHER 60S RIBOSOMAL PROTEIN L8-1 54 111 - -
Aed8g1021 145 PANTHER RIBOSOMAL PROTEIN L2 54 111 IPR002171 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1021 Aed-Chr8 9400311 9401044 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1021 6 111 Cytoplasmic Ribosomal Protein Gene Family AT4G36130 43.357 2.40e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1021 K02938 - pvy:116116700 102.449