Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1017 ATGCAAAGTTCAATTTCATCACAATCTGATATTTGCATCACTGATTACCTTCTACCCCAAGAATTTGCATTTGAATTTCAGCCTCAAATGACATCTTTCTCCAACAACAAGCCTCCAAGATCCTCATCAAATCTTAGCAACCGCAAACCCTCCTTAAAAAACATCACAATCCCTTCCATAACCAATGGTCTTGTTGCAACAACAACAACAACAACAACAATAGCTACAACAACAAACCAAGTTTCTTCTTTTTCATCTTCATCTTCAGATGATGCAAACAACAACACCAACACAAAAGAGGACAATAACAAGCACTATAGAGGGGTTAGAAGAAGGCCATGGGGAAAGTTTGCAGCAGAAATCCGTGACCCTAACAGAAAAGGGTCAAGGGTGTGGCTTGGGACCTTTGACACTGCCATAGAAGCTGCTAAGGCCTATGACAAAGCTGCTTTCAAGATGAGAGGAAGCAAAGCCATTTTGAACTTCCCTTTGGAGATTGAAGACTCAACATCACAAGAACAAGAGTACTCTTCATCAATCAAGGTTGGTGTCAAGAGAGAAAGAGAGGAAGATATCATCATAAGTGAAAACAACAACTATGATCATCATGAAGTGAAAAAGAGTGAGTTTCACAGCAACAACAACAATAGTACTAAAAAGCAATGTTCTCCAAAAGGTGTTGCTGATTGCCCTTTGACTCCATCATGCTGGAAGGGCTTTTGGGACACTGATGTTATGGGAACAATCTTTAGTGTGCCTCCTTTGTCACCACTCTCTCCACTAATGGTTGTTTGA 795 0.4038 MQSSISSQSDICITDYLLPQEFAFEFQPQMTSFSNNKPPRSSSNLSNRKPSLKNITIPSITNGLVATTTTTTTIATTTNQVSSFSSSSSDDANNNTNTKEDNNKHYRGVRRRPWGKFAAEIRDPNRKGSRVWLGTFDTAIEAAKAYDKAAFKMRGSKAILNFPLEIEDSTSQEQEYSSSIKVGVKREREEDIIISENNNYDHHEVKKSEFHSNNNNSTKKQCSPKGVADCPLTPSCWKGFWDTDVMGTIFSVPPLSPLSPLMVV 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1017 264 MobiDBLite consensus disorder prediction 80 96 - -
Aed8g1017 264 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 29 248 - -
Aed8g1017 264 SMART rav1_2 105 169 IPR001471 GO:0003700|GO:0006355
Aed8g1017 264 CDD AP2 104 163 IPR001471 GO:0003700|GO:0006355
Aed8g1017 264 PRINTS Ethylene responsive element binding protein signature 145 165 IPR001471 GO:0003700|GO:0006355
Aed8g1017 264 PRINTS Ethylene responsive element binding protein signature 106 117 IPR001471 GO:0003700|GO:0006355
Aed8g1017 264 Gene3D AP2/ERF domain 104 165 IPR036955 GO:0003700|GO:0006355
Aed8g1017 264 SUPERFAMILY DNA-binding domain 105 165 IPR016177 GO:0003677
Aed8g1017 264 MobiDBLite consensus disorder prediction 80 107 - -
Aed8g1017 264 MobiDBLite consensus disorder prediction 30 53 - -
Aed8g1017 264 Pfam AP2 domain 105 155 IPR001471 GO:0003700|GO:0006355
Aed8g1017 264 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF105 29 248 - -
Aed8g1017 264 ProSiteProfiles AP2/ERF domain profile. 105 163 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1017 Aed-Chr8 9361736 9362530 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1017 17 261 AP2-EREBP Transcription Factor Family AT5G51190 41.129 8.45e-53 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed8g1017 AP2 4.6e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1017 K09286 - gmx:100795866 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1017 8 9361736 9362530 Aed8g1017 8 9361736 9362530 ECH