Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1016 ATGACAACAGCAGAAGAAACTTCAAACTTGGATCTCATACGCCAACACCTCTTAGGTGAAAACAACGTCATCTCAGATTCTTTTTTCTCCAATCTTCTCCATCATGTGAAACTTGAACCACCCTCATCACCAGAATTTGATTTCACCTCATTTATCTCAGACAACACCAACACCAACAACAACAGCTTCTTCACTTTCCTCGAAGGTTATGATTTGGTGGCAGACATGAAGTTTGTTGATTCAGAAAACAACAACAACAACAACAACATTCCCTCAAAGGAAGTTAAGAAATGCAACTCTCCTGAGCAAGAAGTAGTGTCATCATCAGAAGAGAAGGCAAAGAAGAAGTCACAACATGTTGATGAGGCAACAAAGCGTTATAGGGGAGTTAGGAGAAGGCCTTGGGGAAAGTTTGCAGCTGAAATCCGTGACCCTACAAGGAAAGGGACAAGGGTTTGGCTTGGAACATTTGACAGTGAAATTGAAGCTGCTAAGGCCTATGATTGTGCCGCTTTCAAGATGAGGGGACAGAAGGCCATTCTCAACTTCCCTCTCGAGGCCGAAAGAGATAAGAATTCAAGTGGAGAGAAGGAACCTAATGAATAA 606 0.4241 MTTAEETSNLDLIRQHLLGENNVISDSFFSNLLHHVKLEPPSSPEFDFTSFISDNTNTNNNSFFTFLEGYDLVADMKFVDSENNNNNNNIPSKEVKKCNSPEQEVVSSSEEKAKKKSQHVDEATKRYRGVRRRPWGKFAAEIRDPTRKGTRVWLGTFDSEIEAAKAYDCAAFKMRGQKAILNFPLEAERDKNSSGEKEPNE 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1016 201 MobiDBLite consensus disorder prediction 107 126 - -
Aed8g1016 201 MobiDBLite consensus disorder prediction 84 126 - -
Aed8g1016 201 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 5 193 - -
Aed8g1016 201 Gene3D AP2/ERF domain 125 186 IPR036955 GO:0003700|GO:0006355
Aed8g1016 201 MobiDBLite consensus disorder prediction 84 106 - -
Aed8g1016 201 SMART rav1_2 126 190 IPR001471 GO:0003700|GO:0006355
Aed8g1016 201 ProSiteProfiles AP2/ERF domain profile. 126 184 IPR001471 GO:0003700|GO:0006355
Aed8g1016 201 CDD AP2 125 184 IPR001471 GO:0003700|GO:0006355
Aed8g1016 201 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF105 5 193 - -
Aed8g1016 201 SUPERFAMILY DNA-binding domain 126 186 IPR016177 GO:0003677
Aed8g1016 201 Pfam AP2 domain 126 176 IPR001471 GO:0003700|GO:0006355
Aed8g1016 201 PRINTS Ethylene responsive element binding protein signature 127 138 IPR001471 GO:0003700|GO:0006355
Aed8g1016 201 PRINTS Ethylene responsive element binding protein signature 166 186 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1016 Aed-Chr8 9352684 9354427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1016 1 187 AP2-EREBP Transcription Factor Family AT5G07580 39.000 7.94e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed8g1016 AP2 2.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1016 - - gmx:100305726 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1016 8 9352684 9354427 Aed8g1016 8 9352684 9354427 ECH
Aed2g1922 2 23806960 23810651 Aed8g1016 8 9352684 9354427 PCT