Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1014 ATGGCTGAGCAAATGATCAGTGTTGTTGCTGCTTCTTCCTCCAACTATTCTAAGAAACATGACGTTTTTCTAAGCTTTCGTGGCAAGGACACCCGCAGGAACTTCACAAGCAATCTTTATGAAGCTTTGATGCAAAAGAAAATTGAAACCTATATAGACTACCAACTTGAAAAGGGAGATGAAATCACACTAGCACTCGTCAAAGCCATAGAAAATTCTCATATATCTGTTGTCATCTTCTCGGAAAACTATGCTTCCTCAAAGTGGTGCTTGGGTGAACTCAGCAAGATTATGGAATGCAAGAAAGATAAAGGACAGATTGTGATACCAGTATTTTACGACATAGATCCATCACATGTGAGGAAGCAAACTGGGAGCTACGAGCAAGCCTTTGCAAAACATGAGAGTGAACCTAGGTGCAACCAATGGAAAACTGTTCTAACTGAAGTAGCCAATTTAGCTGGGTGGGACTTTCAAACTTATAGGACTGAGTCTGAATTTCTTAATGACATTGTTGACGATATTTTACGAAAATTGGCTCCTAGATACCCAAGCCAACGTAAAGGACTGGTTGGAATTGAGGAAAACTACAAACAGATTGAATCATTATTACAAATTGAGTCAAGGGAAGTTAAAACCATTGGAATATGGGGCATGGGTGGCATAGGCAAGACCACCCTTGCTACTGCTTTATATGACAAACTGTCCTGTAAGTTTGAAGGTCATTGCTTCCTTGCAAATGTAAGGGAAAAATCAGACAAACTCGGAGATTTACGTGATCAACTTTTTTCCAAGTTGTTTAATGACGTGCTTAGGGTTCATCGTAAAAAAGTTTTCATTGTGCTGGATGATGTTGATACCTCAGAGCAATTAGAAAAACTAATTGAAGAATATGATTTCTTGGGACCAGGAAGTAGAGTCATTGTTACAACTAGAAATAAGCAAATATTTCATCCAGTTAATGAAATATATCATGTCAAGGATTTGAGCCCTGATCTCTCTCTTCAACTTTTTTGTATGGCTGTTTTTGGGGAAATACAACCGATAGATGGGTTTGAAGATCTATCAAGAAGAGTAATTTCCTATTGCAAAGGTATTCCTTTGGCTTTAAAAGTTCTGGGTGCAAGTCTTCGTTCAAAAGGTAAAGATATATGGGAATGTAAATTGAGTAAGCTTCAAAAGATTCCAAATATGGAAATTCACAAGGTATTACAATTAAGTTATGATGGGTTAGATCGTTCTCAACGGGACATATTTCTAGACATTGCATGCTTCTTCAAAGGAAAAAGCAGAGGTTATGTAACAAGGGTACTTGACGCTTTTGGTTTCTTTCCAACATCTGAGATAGAAGTACTTATAGATAAAGCTCTCTTAATGTCAGGTGGCTATTGGATACAAATGCATGACTTGATACAGGAAATGGGTCGAGAAATTGTTCATCAAGAGTCTATTAAAGATCCCGAAAAACGAAGTCGGTTGTGGAGATATGAGGAAGTGCTTGATGTATTGAAATATAATAGGGGAACTAATGTTATTGAGGGCATAATTTTGGATATGGATAAAGTAAATGAGGATTTATATTTGAGCTCTGATTCCCTTGTAAGGATGACTAAACTGAGATTTCTTCAAATCAAAGAAAGCTACCAATTTAAGGTGTACTTTCCTAATGGTCTCAAGTCATTGCCACATAAACTGAGGTGTCTTCGATGGAGTGGATTCTCTCTTGAGTCCTTTCCAACTAACTTTTGTGCTGAACAGCTTGTAATGCTTTCCATGACTAGTTCCAAGCTTAAAAAGCTTTGGGACGGGGTTCAGAATCTTGTGAATTTAAAAGAAATTGACCTTGAAGACTCGGAAGACCTGATCGAGATCCCAGACTTATCAAAGGCAGAAAAACTTGAAAAAGTAAACCTTTGTCTATGTTCTTCATTGTGTCAGCTCCATTCATCTATCTCATCTCTTCCCAAGCTTACAAAGTTAATTTTAAGTTGCTGCTTTAAGTTACAAAGCGTTAATGTTCATTCAAAATCTCTCTGTGTACTGAAACTCAATAGTTGTGTATGTCTTGAGAAAGTCTCAGTGATGTCACAAGAAACAACAGAACAAATCTTGTCTTCAGAAGAGATAGACCTACGTGGAAATGTTGGAAGCCTGTCTTCAAACATGAAAAACCTTTCTATGTTGAGAGAACTTTGGTTAAATAATTGCGTCAATCTCATATCTTTGTCGATGCTTCCACCATCCCTGGAAAGGTTGAGTGCTTATAACTGCGTTAATCTGGATGCACAAAAACTAGTGTTACCACACATGATACAGAGGCACATACCCTACTTACACCAACAATATCTTAATGATCCTTACTTTGAAGACAATGATTATTTCTTCTTTTGGGGAGACTGTGTCATTGGAATGTGTGGGTTTCCGAGAGGAGAGAGGTCAATCACTATTCCTTATCTTCCAAAATCTGACTTGTTCGGTTTCATTTATTACATCACTATTTCTTACAAACCACCGAGACAAGATGATGACGACGACGACGGCAACGAGGATGACGATGATGATTATTGGGAGAATCATGGTCAGAATGATACAATTTTAATTAATATCTATGAAGATGGCATACAGGTCTGCCAAAAAGAGATAGATTTAGTTTGTGGCAGCAGTAAACCTTCATATCATCACACGTTATTGTCATATCTTGATGTCAGCCAATTTGAGAGAACATGTGAAGCCTATGATCATTTTAGCAACATAACATTTACATTTGAACTAGATTATAATGAACCTGACCAAGATAGGATACAATGGTATGCAGTCTACCCTGTATATGCCACAACATCAGGGTTAAAGCTAGTCACTAATAGTAGAAACAAATATTTTCAAGAGGAATATATTACTCAAATCTCTGATATTGAGTCACAATCCAGAGGAATTGGAGTTGGAGACTCTAATAATCAAAATGAAGATGACCAGGAACAACTTCTTCCGGCATTAAAGAGGACGAAACTTTACCAAAAACCATGA 3024 0.373 MAEQMISVVAASSSNYSKKHDVFLSFRGKDTRRNFTSNLYEALMQKKIETYIDYQLEKGDEITLALVKAIENSHISVVIFSENYASSKWCLGELSKIMECKKDKGQIVIPVFYDIDPSHVRKQTGSYEQAFAKHESEPRCNQWKTVLTEVANLAGWDFQTYRTESEFLNDIVDDILRKLAPRYPSQRKGLVGIEENYKQIESLLQIESREVKTIGIWGMGGIGKTTLATALYDKLSCKFEGHCFLANVREKSDKLGDLRDQLFSKLFNDVLRVHRKKVFIVLDDVDTSEQLEKLIEEYDFLGPGSRVIVTTRNKQIFHPVNEIYHVKDLSPDLSLQLFCMAVFGEIQPIDGFEDLSRRVISYCKGIPLALKVLGASLRSKGKDIWECKLSKLQKIPNMEIHKVLQLSYDGLDRSQRDIFLDIACFFKGKSRGYVTRVLDAFGFFPTSEIEVLIDKALLMSGGYWIQMHDLIQEMGREIVHQESIKDPEKRSRLWRYEEVLDVLKYNRGTNVIEGIILDMDKVNEDLYLSSDSLVRMTKLRFLQIKESYQFKVYFPNGLKSLPHKLRCLRWSGFSLESFPTNFCAEQLVMLSMTSSKLKKLWDGVQNLVNLKEIDLEDSEDLIEIPDLSKAEKLEKVNLCLCSSLCQLHSSISSLPKLTKLILSCCFKLQSVNVHSKSLCVLKLNSCVCLEKVSVMSQETTEQILSSEEIDLRGNVGSLSSNMKNLSMLRELWLNNCVNLISLSMLPPSLERLSAYNCVNLDAQKLVLPHMIQRHIPYLHQQYLNDPYFEDNDYFFFWGDCVIGMCGFPRGERSITIPYLPKSDLFGFIYYITISYKPPRQDDDDDDGNEDDDDDYWENHGQNDTILINIYEDGIQVCQKEIDLVCGSSKPSYHHTLLSYLDVSQFERTCEAYDHFSNITFTFELDYNEPDQDRIQWYAVYPVYATTSGLKLVTNSRNKYFQEEYITQISDIESQSRGIGVGDSNNQNEDDQEQLLPALKRTKLYQKP 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1014 1007 Gene3D Ribonuclease Inhibitor 509 791 IPR032675 -
Aed8g1014 1007 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 156 IPR035897 -
Aed8g1014 1007 SUPERFAMILY "Winged helix" DNA-binding domain 399 504 IPR036390 -
Aed8g1014 1007 Gene3D - 329 412 IPR042197 -
Aed8g1014 1007 Pfam TIR domain 19 192 IPR000157 GO:0007165
Aed8g1014 1007 MobiDBLite consensus disorder prediction 843 857 - -
Aed8g1014 1007 Gene3D - 16 179 IPR035897 -
Aed8g1014 1007 ProSiteProfiles TIR domain profile. 18 179 IPR000157 GO:0007165
Aed8g1014 1007 SMART till_3 19 153 IPR000157 GO:0007165
Aed8g1014 1007 MobiDBLite consensus disorder prediction 838 857 - -
Aed8g1014 1007 MobiDBLite consensus disorder prediction 976 997 - -
Aed8g1014 1007 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 704 - -
Aed8g1014 1007 MobiDBLite consensus disorder prediction 976 992 - -
Aed8g1014 1007 Pfam Leucine Rich Repeat 587 605 IPR011713 -
Aed8g1014 1007 Gene3D - 180 326 IPR027417 -
Aed8g1014 1007 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 716 837 - -
Aed8g1014 1007 Pfam NB-ARC domain 200 403 IPR002182 GO:0043531
Aed8g1014 1007 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 704 IPR044974 GO:0006952
Aed8g1014 1007 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 422 IPR027417 -
Aed8g1014 1007 SUPERFAMILY L domain-like 525 789 - -
Aed8g1014 1007 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 716 837 IPR044974 GO:0006952
Aed8g1014 1007 PRINTS Disease resistance protein signature 213 228 - -
Aed8g1014 1007 PRINTS Disease resistance protein signature 272 286 - -
Aed8g1014 1007 PRINTS Disease resistance protein signature 363 377 - -
Aed8g1014 1007 PRINTS Disease resistance protein signature 605 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1014 Aed-Chr8 9288602 9297593 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1014 17 762 WRKY Transcription Factor Family AT4G12020 31.714 1.09e-87 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1014 - - gmx:100793798 1026.54