Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1013 ATGGACAGTTCCTTCGGAAAAGACGACATCATATCTCCAACGGACACAGACGGCCACGGAACCCACTGCGCATCCACCGCCGCCGGAAACCCCGTGGAGTCCGCAACTTTCTTCGGCCTCGCCTCAGGCACAGCAAGAGGAGGGGTCCCATCGGCGCGCATCGCCGTCTACAAGCCCTGCTGGTCATCGGGCTGCGAATACGTCGACATCCTCCAGGCCTTCGACGAGGCCATCGAGGACGGCGTCGACGTCATCTCCATCTCGCTAGGGCCGAGTCCCGTGCAGTATTTCGACTATTTTGAGGACGTGTTCGCCATTGGGGCCTTCCATGCAATGAAGAGAGGCATATTGACGTCAAATTCAGCTGGCAACGACGGTCCTGAGCTTTTTACTATGTCTATTTATGCACCGTGGTTGCTTTCTGTGGCTGCTAGCACTATTGACAGGAAGTTTTTCACTCGTGTTCAGTTGGGTGATGGCAAAATATATGAGGGAGTTTCAGTAAATACATTTGATCTTAAAGATGAAAGTTATCCACTAATTTATGGTGGAGATGCACCCAACATTACTGGTGGATACAATAGTTCCATATCCAGGTTATGCCTCGAAGATTCATTGGATGAGGAATTGGTGAAGGGAAAGATTGTACTGTGTGATGATTATAGTGGTTCTTCATCTGTGGGTTTGGTTTCTGGAGCAGCTGGTATTTTACTAACAAGCTTAAGGTCAAAAGACGTTGCAGATTCATTTGCATTGCCAGCATACAGTAATCCGAGTGCCACTATATTTAAGAGTAACGAAGGCAAAGACTCGTTAGCCCCTTACATAGCTTCATTCTCATCTAGAGGTCCAAATGCAATCACTCCAAACATTCTTAAGCCTGATATAGCTGCCCCTGGAGTTAACATATTAGCAGCATGGAGTCCAATTGGTTCAGTTTCTGGGTTCAAAGGTGATGAGAGAAAATCAAACTATAATATAATATCTGGCACCTCAATGGCATGCCCTCATGTTACTGCAGCTGCTGCTTATATCAAATCTTTCCATCCAGATTGTAAATGGACTACCCCAATGAGCTCTGCACTTAATCCAGAAGCTGAATTTGCCTATGGTGCTGGACAAATCAACCCCATAAAAGCAGTGAATCCTGGCTTAGTATATGATGCAAGTGAAATCGATTATGTCAAGTTTTTATGTGGACAAGGTTATGATACCAAGAAGCTACAAACTATTACCAATGATAATAGTAGTTGTACAAAACCCAATAATAATGGAATAGTTTGGGATCTAAACCTCCCATCATTTGCACTCTCCGTTATGAACACCACAACATTTTTCAGTCGAGTTTTTCTTAGAACCGTTACCAATGTTGGATCTGCCACATCAAAATACAATGCTAGAGTGGTTGCACCTCCATCTTTGTTGAACATTAAAGTCGAGCCAGATGTTTTGTCCTTCTCATTTGTGGGTGAAAAGAAGTCCTTCACTCTTAGGATTGAAGGGAGAATTAATGTGGATATAATTTCTTCTTCTTTGCCTGTTACTATCAGTGATACATTTACTTCAATCACTAGTCGAAGTCTCTCCTTTATCTCCAAAGTCTCTGATCTTCTCTCGGTTCCACCTACAAGTAAAGTCATCATCCAGAGGCCTCTCAAAGATGACAATGTTGCTAAACTTGTTCAACATTGA 1692 0.4374 MDSSFGKDDIISPTDTDGHGTHCASTAAGNPVESATFFGLASGTARGGVPSARIAVYKPCWSSGCEYVDILQAFDEAIEDGVDVISISLGPSPVQYFDYFEDVFAIGAFHAMKRGILTSNSAGNDGPELFTMSIYAPWLLSVAASTIDRKFFTRVQLGDGKIYEGVSVNTFDLKDESYPLIYGGDAPNITGGYNSSISRLCLEDSLDEELVKGKIVLCDDYSGSSSVGLVSGAAGILLTSLRSKDVADSFALPAYSNPSATIFKSNEGKDSLAPYIASFSSRGPNAITPNILKPDIAAPGVNILAAWSPIGSVSGFKGDERKSNYNIISGTSMACPHVTAAAAYIKSFHPDCKWTTPMSSALNPEAEFAYGAGQINPIKAVNPGLVYDASEIDYVKFLCGQGYDTKKLQTITNDNSSCTKPNNNGIVWDLNLPSFALSVMNTTTFFSRVFLRTVTNVGSATSKYNARVVAPPSLLNIKVEPDVLSFSFVGEKKSFTLRIEGRINVDIISSSLPVTISDTFTSITSRSLSFISKVSDLLSVPPTSKVIIQRPLKDDNVAKLVQH 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1013 563 MobiDBLite consensus disorder prediction 1 25 - -
Aed8g1013 563 ProSiteProfiles Serine proteases, subtilase domain profile. 1 381 - -
Aed8g1013 563 Gene3D - 398 527 - -
Aed8g1013 563 Gene3D - 148 269 - -
Aed8g1013 563 ProSitePatterns Serine proteases, subtilase family, histidine active site. 19 29 IPR022398 -
Aed8g1013 563 Gene3D Peptidase S8/S53 domain 7 394 IPR036852 GO:0004252|GO:0006508
Aed8g1013 563 PANTHER CUCUMISIN-LIKE 3 526 - -
Aed8g1013 563 PRINTS Subtilisin serine protease family (S8) signature 329 345 IPR015500 -
Aed8g1013 563 PRINTS Subtilisin serine protease family (S8) signature 15 28 IPR015500 -
Aed8g1013 563 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 526 IPR045051 -
Aed8g1013 563 Pfam Subtilase family 12 356 IPR000209 GO:0006508|GO:0008236
Aed8g1013 563 ProSitePatterns Serine proteases, subtilase family, serine active site. 330 340 IPR023828 -
Aed8g1013 563 Pfam Fibronectin type-III domain 429 502 IPR041469 -
Aed8g1013 563 CDD PA_subtilisin_like 155 286 - -
Aed8g1013 563 SUPERFAMILY Subtilisin-like 12 385 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1013 Aed-Chr8 9283217 9288942 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1013 12 502 Subtilisin-like Serine Gene Family AT5G59190 46.768 2.26e-148 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1013 - - gmx:100801111 827.394