Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1007 ATGAAGAGAAGCCAACATAGAAATAAACGAACCGAAGCAGTAGAACACGGTCCAAGAGAGACAACACAAACAAACCAAACCAGAAGGTTCTGTATATGTGAAGCAATATTTGATATGGGGAACACATGTGTTGGTCCTAGCATTTCAAAAAATGGTTTGTTTCAATCAGTTTCCGCGGCGATTTGGCGTGGCCAATTGCCCGAAGATTCAGTGTCTAATAGAGAATCTGTAAAAGAGGAGACAAGTAGTGTGCCGGAGTCGCCTTTGCCTGTCCAAAACAAGCCTCCGGAGCAGATAACTATGCCTAAGCCAGAAGCCAAACAAGAGGGGAAATCAGAAATTGAACCGGAACAGGAGAAAGAGAAGGAGAAGGAGAAGAAGAAACAGAAGAAACGCGGCTCGGTGAAGAGAGTTTCTAGTGCAGGGCTCCGTGTTGATTCCGTGTTGCAAAGAGAGACTGATAACTTCAAGGAATTCTTCACTCTTGGGAGAAAACTCGGGCAGGGTCAGTTCGGGACGACGTTCTTGTGCGTGGAGAAGGCAACGGGGCAGGAGTATGCCTGTAAGTCTATTGCAAAGAGGAAGCTCGTCACTGATGATGATGTCGAGGATGTGAGGAGAGAAATTCAGATAATGCACCACTTGGCTGGTCATCCTAATGTTATATCCATCAAAGGTGCATACGAGGATGCCGTGGCCGTTCACGTTGTGATGGAATTGTGTGCAGGTGGAGAGCTTTTTGATAGGATTATTCAGCGGGGGCATTATACCGAGAGACAGGCTGCTGAGCTTACTAAGACTATAGTTGGCGTCGTGGAAGCTTGCCATTCTCTTGGCGTGATGCACCGAGACCTTAAACCTGAGAATTTTCTCTTCGTCAATCAGCATGAGGATTCACTTCTCAAAACCATTGACTTTGGATTATCTCGTTATGGTCCTGAGGCAGATGTTTGGAGTGCTGGTGTTATCCTTTACATTCTTTTGAGTGGAGTACCTCCATTTTGGGCTGAAAACGAACAAGGAATATTTGAACAAGTTCTGCGTGGTGATCTTGACTTTTCTTCTGATCCCTGGCCTTCAATTTCTGAAAGTGCAAAAGATTTAGTGAGGAAAATGCTTGCTCGTGACCCTAAAAGGCGGCTGACTGCTCATCAAGTATTATGTCATCCTTGGATTCAAGTTGATGGTGTAGCTCCTGACAAGCCACTTGATTCTGCTATTATTGCTGAGAGCTTATCTGAAGAAGAAATTGCTGGCTTAAAAGAGATGTTCAAGATGATAGATGCAGACAACAGTGGTCAAATCACTTTTGACGAACTCAAAGCTGGTTTGAAAAGAGTGGGTGCTAATCTTAAGGAGTCTGAAATTTATGATTTAATGCAAGCGGCTGATATTGACAACAGCGGGACAATTGATTATGGCGAGTTCCTCGCTGCAACATTGCACCTCAACAAAATTGAAAGAGAAGATCATCTATTTGCAGCCTTTTCTTACTTTGACAAAGATGGAAGTGGCTATATTACTCAGGAAGAACTTCAACAGGCTTGTGATGAGTTTGGCATTCAAGATGTCCGCTTGGAAGAGATAATCAAGGAAATTGATGAAGATAATAAAGGAAATCTTCCATCGGTTGGCAAGAAGGGCCTAGAAAATAGCTTCAGCATTAAGTTCAGAGAGGCATTAAAATTGTAG 1692 0.4356 MKRSQHRNKRTEAVEHGPRETTQTNQTRRFCICEAIFDMGNTCVGPSISKNGLFQSVSAAIWRGQLPEDSVSNRESVKEETSSVPESPLPVQNKPPEQITMPKPEAKQEGKSEIEPEQEKEKEKEKKKQKKRGSVKRVSSAGLRVDSVLQRETDNFKEFFTLGRKLGQGQFGTTFLCVEKATGQEYACKSIAKRKLVTDDDVEDVRREIQIMHHLAGHPNVISIKGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERQAAELTKTIVGVVEACHSLGVMHRDLKPENFLFVNQHEDSLLKTIDFGLSRYGPEADVWSAGVILYILLSGVPPFWAENEQGIFEQVLRGDLDFSSDPWPSISESAKDLVRKMLARDPKRRLTAHQVLCHPWIQVDGVAPDKPLDSAIIAESLSEEEIAGLKEMFKMIDADNSGQITFDELKAGLKRVGANLKESEIYDLMQAADIDNSGTIDYGEFLAATLHLNKIEREDHLFAAFSYFDKDGSGYITQEELQQACDEFGIQDVRLEEIIKEIDEDNKGNLPSVGKKGLENSFSIKFREALKL 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1007 563 ProSiteProfiles EF-hand calcium-binding domain profile. 487 522 IPR002048 GO:0005509
Aed8g1007 563 Gene3D Transferase(Phosphotransferase) domain 1 202 393 - -
Aed8g1007 563 SUPERFAMILY Protein kinase-like (PK-like) 159 393 IPR011009 -
Aed8g1007 563 SMART serkin_6 160 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1007 563 ProSitePatterns EF-hand calcium-binding domain. 428 440 IPR018247 -
Aed8g1007 563 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 310 540 - -
Aed8g1007 563 ProSiteProfiles EF-hand calcium-binding domain profile. 415 450 IPR002048 GO:0005509
Aed8g1007 563 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
Aed8g1007 563 Pfam EF-hand domain pair 420 480 IPR002048 GO:0005509
Aed8g1007 563 Pfam EF-hand domain pair 490 539 IPR002048 GO:0005509
Aed8g1007 563 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 102 309 - -
Aed8g1007 563 ProSiteProfiles Protein kinase domain profile. 160 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1007 563 PANTHER SERINE/THREONINE-PROTEIN KINASE 102 309 - -
Aed8g1007 563 ProSitePatterns Protein kinases ATP-binding region signature. 166 193 IPR017441 GO:0005524
Aed8g1007 563 PANTHER SERINE/THREONINE-PROTEIN KINASE 310 540 - -
Aed8g1007 563 ProSitePatterns EF-hand calcium-binding domain. 464 476 IPR018247 -
Aed8g1007 563 SMART efh_1 419 447 IPR002048 GO:0005509
Aed8g1007 563 SMART efh_1 491 519 IPR002048 GO:0005509
Aed8g1007 563 SMART efh_1 455 483 IPR002048 GO:0005509
Aed8g1007 563 CDD EFh 420 479 IPR002048 GO:0005509
Aed8g1007 563 MobiDBLite consensus disorder prediction 104 128 - -
Aed8g1007 563 CDD STKc_CAMK 159 391 - -
Aed8g1007 563 ProSiteProfiles EF-hand calcium-binding domain profile. 451 486 IPR002048 GO:0005509
Aed8g1007 563 Pfam Protein kinase domain 161 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1007 563 Gene3D - 400 543 - -
Aed8g1007 563 ProSitePatterns EF-hand calcium-binding domain. 500 512 IPR018247 -
Aed8g1007 563 MobiDBLite consensus disorder prediction 68 136 - -
Aed8g1007 563 MobiDBLite consensus disorder prediction 1 24 - -
Aed8g1007 563 SUPERFAMILY EF-hand 412 541 IPR011992 -
Aed8g1007 563 Gene3D Phosphorylase Kinase; domain 1 164 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1007 Aed-Chr8 9236379 9241484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1007 39 563 EF-hand Containing Proteins AT5G04870 68.506 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aed8g1007 Pkinase 4.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1007 K13412 - gmx:100797449 907.131