Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0991 ATGGCTCCTACACTTCAACGTGCACTTTCTCATTTACTCACTATTATAGCTTCACTTTCAATGCTTCTTGTGGTCCCATCCTATTGTTTCAACCCTAAAAAGATTGTGAATGGTTCCTATGCTAATTCATACTCTTTATATGCTTCAGATTGGTCACCTGCTGTGGCCACTTGGTATGGATCTGCCCAAGGGGACGGTAGTGAAGGTGGTGCTTGTGGTTATGGCAGTGCTGTTGGGGAACCTCCTTTCTCATCATTGATATCTGCAGGAAGCCCTCTTTTGTTTGAATCAGGCAAAGGCTGTGGTTCTTGTTATGAGGTGAAGTGCAGTGGGAATTATGCATGCTCAGGAGATTCAGTGAGGTTAGTGATAACTGATGAATGTCCAGGATGCACAGATGCTCAATATCATTTTGATTTGAGTGGCACTGTTTTTGTTGAATGCAACTATCCCGGTGTGTCAATATCTTTCCGAGTGGACTCAGGATCCAACCAGGAATATTTTGCAATCTTGATTGAATATGAGGGTGGTGGTGGTGACCTTAACAAAGTTGAACTCAAGGAAGAAGCACTTGATTCAGCACCATGGTACTCCATGCAAAGATCATGGGGTGCAGTTTGGAAACTTGACAGAGGCTCACCACTTGTTGCACCATTTTCCATTAGGTTAACCACTCTCAAATCTGGCAAGACCATTGTGGCTAACAATGTCATTCCTAAGGGCTGGACCATTGATAGGACTTACAGATCAATTGTCAATTTTTAA 765 0.4301 MAPTLQRALSHLLTIIASLSMLLVVPSYCFNPKKIVNGSYANSYSLYASDWSPAVATWYGSAQGDGSEGGACGYGSAVGEPPFSSLISAGSPLLFESGKGCGSCYEVKCSGNYACSGDSVRLVITDECPGCTDAQYHFDLSGTVFVECNYPGVSISFRVDSGSNQEYFAILIEYEGGGGDLNKVELKEEALDSAPWYSMQRSWGAVWKLDRGSPLVAPFSIRLTTLKSGKTIVANNVIPKGWTIDRTYRSIVNF 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0991 254 PANTHER EXPANSIN-B3 13 145 - -
Aed8g0991 254 PANTHER EXPANSIN-B2-RELATED 13 145 - -
Aed8g0991 254 SUPERFAMILY PHL pollen allergen 155 250 IPR036749 -
Aed8g0991 254 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 166 250 IPR007117 -
Aed8g0991 254 PANTHER EXPANSIN-B2-RELATED 146 254 - -
Aed8g0991 254 Pfam Lytic transglycolase 88 147 IPR009009 -
Aed8g0991 254 Gene3D - 47 154 IPR036908 -
Aed8g0991 254 SMART dpbb_1 87 157 IPR007112 -
Aed8g0991 254 Gene3D - 155 254 IPR036749 -
Aed8g0991 254 PANTHER EXPANSIN-B3 146 254 - -
Aed8g0991 254 SUPERFAMILY Barwin-like endoglucanases 46 173 IPR036908 -
Aed8g0991 254 Pfam Expansin C-terminal domain 155 239 IPR007117 -
Aed8g0991 254 PRINTS Expansin/Lol pI family signature 68 86 IPR007118 GO:0005576
Aed8g0991 254 PRINTS Expansin/Lol pI family signature 236 250 IPR007118 GO:0005576
Aed8g0991 254 PRINTS Expansin/Lol pI family signature 50 65 IPR007118 GO:0005576
Aed8g0991 254 PRINTS Expansin/Lol pI family signature 91 109 IPR007118 GO:0005576
Aed8g0991 254 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 69 177 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0991 Aed-Chr8 8938250 8940540 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0991 27 254 Expansin Gene Family AT1G65680 52.778 9.32e-88 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0991 - - gmx:100777550 437.958