Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0989 ATGCATAGATATACGCAACAACAGAATGATACGAGGACTCGGTCGCTGACTCAGTTCTCTTCTGGTAAATTGACTCGGTCACAACACAGGATGATGCCAATGTTCCCTGAAGAGGTGGGGGAGGGCCTCTGGGAAAAAGTTGCTGAGAAGATCATGGAACGCTATCACCAAGCATTGTTTCGTGACACCACCATCCATTCCGAATCGACTCAAGTTGAATTGTCGACTGACTCACCAAAGCTTGTTAAGAGAAGAAAGGGGACATCCTGGAAGCCCTGGACTCAAGAAGAACACAGGTTATTTCTTCTTGGACTCAAACTATATGGCAAAGGAGATTGGAAAAACATTTCAAAGCATTGTGTGAAGTCAAGAACTCATATTCAAGTTGCTAGTCATGCCCAAAAATACTACCTTCATGAGAAAGATTCAAAGAAAGAGAGCAAAAGAAAAAGTATTTATGACATAACATTGCAGAACAAACGCGTGATTCCTCCTCATCACCACGCTAACATTGCACAATATAGGGCTCCTCCTCCAAAATCGCAGCAATTGCAGCCACAAAGAATGTTTCTTCAAATGAATTCACAAGATGACATTGCTATTGAATTTGAAATTTCAGTTGAAGATCCTTCTTCTGTAATTGATGTTGAAATAGTTCACATTGATCAAACCAAGCTACGTGGAGCTAGGAAAATAGACCTTGGGAAAATTGATATGGTTCACCGTAGAAGAGTTGTATGCAACTACCCCAACATATCAGTAATTTTTCAATGCAATCCATGCAACAATGAAGGGATGCAGTTTGGAAACTTTAAAAGGATCTTTACTAAAAGACACATTCTCAGGTGGTCAGGTGGGCGCCTATCTAAGATCTTGTAG 879 0.4073 MHRYTQQQNDTRTRSLTQFSSGKLTRSQHRMMPMFPEEVGEGLWEKVAEKIMERYHQALFRDTTIHSESTQVELSTDSPKLVKRRKGTSWKPWTQEEHRLFLLGLKLYGKGDWKNISKHCVKSRTHIQVASHAQKYYLHEKDSKKESKRKSIYDITLQNKRVIPPHHHANIAQYRAPPPKSQQLQPQRMFLQMNSQDDIAIEFEISVEDPSSVIDVEIVHIDQTKLRGARKIDLGKIDMVHRRRVVCNYPNISVIFQCNPCNNEGMQFGNFKRIFTKRHILRWSGGRLSKIL 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0989 292 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 92 139 IPR006447 GO:0003677
Aed8g0989 292 Gene3D - 93 141 - -
Aed8g0989 292 CDD SANT 92 136 IPR001005 -
Aed8g0989 292 Pfam Myb-like DNA-binding domain 92 136 IPR001005 -
Aed8g0989 292 ProSiteProfiles Myb-like domain profile. 85 137 IPR001005 -
Aed8g0989 292 PANTHER TRANSCRIPTION FACTOR KUA1 17 190 - -
Aed8g0989 292 MobiDBLite consensus disorder prediction 1 27 - -
Aed8g0989 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 141 IPR017930 -
Aed8g0989 292 SUPERFAMILY Homeodomain-like 91 141 IPR009057 -
Aed8g0989 292 SMART sant 89 139 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0989 Aed-Chr8 8903778 8906902 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed8g0989 Myb_DNA-binding 4.5e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0989 - - gmx:100776492 287.73