Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0976 ATGGCAGAGGATATGGAAATTGATCACATTGTCGAAGTTCCTGATACCCCAGATAGAATAACTGTTAGGCGCGATGATCAGATATATTTAGGTAATCCTGAGAAGAGAGGTAGAGGTTTTGATGCTGCTGATGAAAAGAATAACCACAATAACTATATATCATTGTCCCCGTCAGAGGAATCTTATACTTCTCAAAATGCTCCCATCTTTAGGAGAGCCCAAATTGATGGAGCTGAAAAGATGGAGAAAGGGAAAAGTACAAGTTCCAAGGTTCCTTCTAAATCATCTCACCATGGTATTTCTGTTTTAGATTTGACTGAAGAGAAAACACAATTCCGACAACTGAAACCAGCTTTTTCACATCGTGTTTCAAGAGATAATGCAACTGAAGACAAGAAAGCACTGAAAGCAACTGGTGGGAACTCTTTGTTGCCCATTATTGCTGATTCTTCTAATACATCTAGCAGTGCCTTCACTGGAAAGTGTAAACTAGATTATAAAACACTTCCAGGGCCTAACATATCTGTGGACCGTGGCAAGGGTATTTCTCTGTCTAATGATTCTCAATCACAAAATGAAAAGCAAGTGTCTATTCCTCCTCGTGTGTTCACCTCTCCACGAGGTAGAGGGCACAAGAGATTGGTACGAAATGGGTGCATTTCACCTCATAATATTGCAACAATTGAAAAACAATTAGCTGAACAGAGCAGCCATCAAGCCAAAGATGTTGAACAGAGTCATGCTGGGCATTCAGTTTCTAGCAATACAGTGTCACCGATTAGTGTTGATGACATAGTTGCCGTAGAGAGAGGCAATGGTAGAATGAAAGGAAAGGAAGTACTTACTCATCCTTCATCACAGAGACTGACATTTCGCACCGCTAGCAGCGGCCCTTTGACCAATTATGGAGAGATCAATGGTACCAGTAATGCTTTAAGAAATTCACTTCAATACTCTGGGGAACAAGGTAGTTGGAGATCTACTCATAATGAGAGGAATGCTGATCAGCACTTGTATGATGTAAACGGGCATAATTCCAGGAGAAATAATGATGGAAGATTTATTAATAGACAGAATACAAACAAAGTTGACAGAAGAAACATTGGGAGTGGCCCAAGCAGCAATCATATACATGGTTCTCATTCAGATCATACAGCTCAACCAACTTCTGTGATCATTCCAGATGTGGACCAGTCATCTCGTCCTACTGCTGACATTCTGACTAAAAGGCAAAGACAAAGGAAACGTGAATCACCTTCGGGAAATCCTAATGAAGCATCTTATAATTCTGGAATTATGTTCCTCGGATCAACTGGGGAATCATCAAGCTCATCTCGGAGGTCTGTCATGGATGCTGAAGTTGTGGAGTTGTTATCCTTATCCACACCAAGGGGTTCATCAAGCTCATCTCGAAGCCAAGTCTTGGATCATGAAGTGGTTGATTTGTTAACACCAAGCTATGCCAACAGATCATCTGAAGATTTAGATGATAATGACAATAATAGCTCAGATGCTCGGGCAAGACAAGTGGAAGCAGATGAGAGATTGGCACGTGAACTCCAAGAACAGCTGTATCACGATGATTCTTTTGAAGGCGGAGGGGTTAATGATGAACATTTAGCACGGGACTTGCAGCGTGCGGAGGCTCTTCTACGTACAACTGTTGATAGTCACAACATAAATCATCCTACACAGCTTTCCAGGGCAAATAGACAGCCTCGTACACGGTTTCAACAAAATCCTTCCAGAAGGAGAGCTGTGGCTCAAGTTTCTTTCTCTAATAGAATGTCACAATGGAGGACTCGTGCTACAAGTCGGACTCGGGCACCAATCATATCATCTAGAGCAAGAGGCCCCCGGTTTCCTCTGGATATGGACTTAGATATGAGACTTGATATATTGGAAGCTTTAGAGGATTCAATGGGGGATTTCAATGATATGGGAATAACTGACGACATGTTTAATGCGCGTCGTGATTTCACTGAGTTCATGCCCTCATGCAGCACCGATTATGAAATGTTATTGGCCCTTGATGAGGGAAATCACCAACATACTGGTGCATCTGCCAATCTGATCAATAGCTTGCCTCAGTCCACCATCCAGACTGATAACTTCACGGACGCATGTGCCATATGTCTTGAGACCCCAGTCAAAGGAGAAACTATTCGCCACCTTCCTTGTTTGCACAAATTTCACAAAGATTGTATTGATCCATGGCTCCAGAGGAAAACGTCATGCCCGGTGTGCAAGTCGTCGATCACCTAA 2265 0.4252 MAEDMEIDHIVEVPDTPDRITVRRDDQIYLGNPEKRGRGFDAADEKNNHNNYISLSPSEESYTSQNAPIFRRAQIDGAEKMEKGKSTSSKVPSKSSHHGISVLDLTEEKTQFRQLKPAFSHRVSRDNATEDKKALKATGGNSLLPIIADSSNTSSSAFTGKCKLDYKTLPGPNISVDRGKGISLSNDSQSQNEKQVSIPPRVFTSPRGRGHKRLVRNGCISPHNIATIEKQLAEQSSHQAKDVEQSHAGHSVSSNTVSPISVDDIVAVERGNGRMKGKEVLTHPSSQRLTFRTASSGPLTNYGEINGTSNALRNSLQYSGEQGSWRSTHNERNADQHLYDVNGHNSRRNNDGRFINRQNTNKVDRRNIGSGPSSNHIHGSHSDHTAQPTSVIIPDVDQSSRPTADILTKRQRQRKRESPSGNPNEASYNSGIMFLGSTGESSSSSRRSVMDAEVVELLSLSTPRGSSSSSRSQVLDHEVVDLLTPSYANRSSEDLDDNDNNSSDARARQVEADERLARELQEQLYHDDSFEGGGVNDEHLARDLQRAEALLRTTVDSHNINHPTQLSRANRQPRTRFQQNPSRRRAVAQVSFSNRMSQWRTRATSRTRAPIISSRARGPRFPLDMDLDMRLDILEALEDSMGDFNDMGITDDMFNARRDFTEFMPSCSTDYEMLLALDEGNHQHTGASANLINSLPQSTIQTDNFTDACAICLETPVKGETIRHLPCLHKFHKDCIDPWLQRKTSCPVCKSSIT 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0976 754 MobiDBLite consensus disorder prediction 179 199 - -
Aed8g0976 754 MobiDBLite consensus disorder prediction 232 257 - -
Aed8g0976 754 MobiDBLite consensus disorder prediction 47 67 - -
Aed8g0976 754 MobiDBLite consensus disorder prediction 177 211 - -
Aed8g0976 754 ProSiteProfiles Zinc finger RING-type profile. 709 750 IPR001841 -
Aed8g0976 754 MobiDBLite consensus disorder prediction 340 448 - -
Aed8g0976 754 MobiDBLite consensus disorder prediction 352 406 - -
Aed8g0976 754 Pfam Ring finger domain 708 750 IPR001841 -
Aed8g0976 754 SUPERFAMILY RING/U-box 703 753 - -
Aed8g0976 754 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 676 754 IPR013083 -
Aed8g0976 754 SMART ring_2 709 749 IPR001841 -
Aed8g0976 754 MobiDBLite consensus disorder prediction 485 511 - -
Aed8g0976 754 MobiDBLite consensus disorder prediction 555 585 - -
Aed8g0976 754 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 642 752 - -
Aed8g0976 754 CDD RING-H2_PA-TM-RING 709 750 - -
Aed8g0976 754 MobiDBLite consensus disorder prediction 31 45 - -
Aed8g0976 754 MobiDBLite consensus disorder prediction 420 448 - -
Aed8g0976 754 MobiDBLite consensus disorder prediction 31 67 - -
Aed8g0976 754 MobiDBLite consensus disorder prediction 284 308 - -
Aed8g0976 754 MobiDBLite consensus disorder prediction 492 511 - -
Aed8g0976 754 PANTHER - 642 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0976 Aed-Chr8 8547575 8557548 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0976 499 754 C3H Transcription Factor Family AT1G04790 48.718 8.81e-64 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0976 - - gmx:100796218 1123.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0976 8 8547575 8557548 Aed8g0976 8 8547575 8557548 ECH