Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0973 ATGGAATTCCCTCATTCGCGCTCACTCCCTCACACACCTCCTCCTTACACCTCTTCTCCCAAATGTTGCACTCCGGCCTACCCCAATTCCCACACCTTCCCTTCACTCTTCAAGTCCCGCGCCAAAGCAAATGCCACCCTCCAAGGCAAACAACATCACGCGCACGCCCTCAAGCTCGTCCTTCACTCCCACCCGCATCTCCACACTTCAATCATTCCCATGTACTCCCAAGTTCGCGAATTGCACGATGTGCAGTTGGTGTTTGATAAATGTACTCTCAGAGACGCAGTCTCCTTCATCGCTCTTATTACTGGTTTTAAAGCCCTACCTGTGAGTTTGATCTTACATTTCTCTTTTATTTTTTCCCTCAACAATCCTTTGGATCCATTGCTTCCCTTTATGGACTCCATATTAGGCTTAGATGATGTTATTATTCACTATGATGCTTTGAATCTTCCAAGTATGGATAAGGAGGATAAGACAACACTAAAGGAAGACTGCATCAAGGGAGCTGAGATAAATTCTTCCGATTATAAGACTACATCCAAGGAGCAACAACACTACACCATTTTGATTTTTGCATGTATTTTGCTCATCCACCATGAGTGGAGTGTGCTTAAAGTGCACAAAGTTTGGTTCAATGATGAAGGAGTTCACAAAGTTGTAGGGTTGTTAAGGCAGCATAAGCCCCATATAAGTTTTCCCAACTCAAAAACCCTCACTTGTGTGATATGTCTTGATGTTGTGGCATGTGATAAGAAGTATATGGATACAAGCATCAATGAGGGTTTGAATAAATGCTTGAAACTTAGATGCCTTCAACCCTCTTGTAATGCAACTGTGGGTGGAGACATGATTCGTGAACTTCCAAGCGAGTCAAAGAGAAACAATTGTGGGGAAGAAGCACATAGCCCTATAGATTGTGAAATTGTGAAACATTGGACCACAAATCATGATTTTGAATCCTTTAAAAACACTCTTTGGATTCTTGCTAATACCAAGTCTTGTCCTAAATACAAGAAACTTATTAAGAAAATTGACGGTTACAACTGTGTCCATTTTCCTAACAAGGATATTTTCACGAAGGAAGTGAAAAGAATTGCATTAAATGATTATTTAGAGGATTGCACTCGCTATTGTGAGGGTTAG 1149 0.4134 MEFPHSRSLPHTPPPYTSSPKCCTPAYPNSHTFPSLFKSRAKANATLQGKQHHAHALKLVLHSHPHLHTSIIPMYSQVRELHDVQLVFDKCTLRDAVSFIALITGFKALPVSLILHFSFIFSLNNPLDPLLPFMDSILGLDDVIIHYDALNLPSMDKEDKTTLKEDCIKGAEINSSDYKTTSKEQQHYTILIFACILLIHHEWSVLKVHKVWFNDEGVHKVVGLLRQHKPHISFPNSKTLTCVICLDVVACDKKYMDTSINEGLNKCLKLRCLQPSCNATVGGDMIRELPSESKRNNCGEEAHSPIDCEIVKHWTTNHDFESFKNTLWILANTKSCPKYKKLIKKIDGYNCVHFPNKDIFTKEVKRIALNDYLEDCTRYCEG 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0973 382 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 297 351 IPR031127 GO:0004842|GO:0016567
Aed8g0973 382 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 192 296 IPR031127 GO:0004842|GO:0016567
Aed8g0973 382 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 192 296 - -
Aed8g0973 382 MobiDBLite consensus disorder prediction 1 21 - -
Aed8g0973 382 Gene3D - 304 357 - -
Aed8g0973 382 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 297 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0973 Aed-Chr8 8515915 8520491 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0973 196 353 ARIADNE family AT1G65430 34.667 3.67e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0973 - K11968 gmx:100801350 295.819