Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0965 CTCCCTCCCCGGGAGAATCAAAAAACATGCTCAGCATTCAGAAGAAATGCAGCACCTAACGTTTCTCCCTCTTTCCTCTCGTCTTCGCCACCTCTTCTGATTCCCTCTGTTGTTGCTCGCTCTCGCTTCAACGACGTCGTTTCACCAGAAGAACAACAGTTTTTTTTTTTCCGGCGACTACACTCTCTCTTCTTTCTCTCGGTTTTGATTGCTGGAGTAAGCATTCAAGCTTCGACCGAAAGAGCACTTGCAGCATGTCGGGCAATGTCAAGTCTTGGTATTGATGATTCGAAAGTGAAATCAGTGTTAAAGAAACTCCTCAAAGTGTATGATAAAAATTGGGAGCTGATTGAGGCAGAGAACTACAGGGTTCTAGCAGATGCTATATTTGAGGACGACGATAATGTGGTGCATGAGCCAAAAAAGAGAAGCCAGACAGCCGATGTACATAACCCTCGTCATTCTTTGTCTCCTTCCTTTACAAACCACCAGGAAGCAGAGGCAGAGGTTGAAGAGGCTCAGATGCATATTCTAACAGCTCGGCCTTTGAAAAGGTTGCGATTACAAGGCCAAGAGAGTCAGCCTTTGCATTCTCTGACTAACAGTGCCCCCAGTCCTTCATCAAAAAAACTTAAATTAGAAGATGCAGGGAAGAAGCCTCAAAACAAACCAGTGTCATCTGGTGGGAATCCAAGGGATGAAGCATGTCCACTTCCACCACAAGATGGCATTGTTGATAAGGGAAAGCAACCTGCATCACCCCAAGTTTCACACAGAGGAAGAAGACTTACATCTGAAAGAGAATCTCCTTCTAAAGAACCAACAGTCGAACCAGGGAAGTTTCTGTTGCCAAACAAACAAATTCCTCGTATTCACACACTGATCATACCCAAGGATGAGCCTATTGATGAATTGCCTGATTATGAGATGCCCATTGCAGTGATTCCTCCTGAACCATCAAGTGCAAGGGGCTCGCGAATGAAGAATGGCGTAGCTGGAAAGCTTAGTGGTCATGTTAATGTGACATCATCAGAAAGGAGAGATGGAGTTAGAGATGAAGATGTTGTTCCTACCTCAAATGAAGAAGAGAATTGTAATGTAGAGATAGCCTCATCAACTCTTGGAGGGGTAAAACTTTCTTTGAGCTGCAGCTCAGCTCATCGGGGATCACATTTTCAAATGCCTACTCGAGATCAACTTATAGAAATGATGGAGGATAAATGTCTGCGTTCATATAAAATCACTGATCCAAATTTCTCTGTCATGAAACTGTTGAGAGATATATGTGATTGCATGTCGGAATTCACAAATGATTCAATTGATGAATCCCAAGAAGGATCTATGATCAGTTCCAGTGTTGATGCGTTGAAGGAATCACAGGCACCTGGCACACCCTGTGTGGTAGGAAATAAAGATTTGGATATGCCCTCTCACATTTCAAACGGATCCATCAATGTTAAGTCTTCTGATGACTCGGTTTCTCCCCAAAGTCTCCTTCCTCTACCCCACTCGAATGGTCTGAATGATGCTGTACTGCTTTCTAAGATAGACAAAACAAATGATTTTTCGCAAAGTAATGTCAGAAACGAGCTGGAAGATCCTATGTCTCCAAATTCACATAGTTTAGTGGTTGTTCCACCGAATCAGTTTACAGCTGATGATATAAGATCTTTTCATGATGCTAATGATCTTACAAAAGGAGAAGAAAATGTTGAAATCCCATGGGTGAATGAAACTACTAATGATTTCACACCATCTTTTAACTACATACCCCAAAACCTTGTGTTCCGAGATGCTTATGTTAACATTTCTCTTTCACGTATTGGCAGTGAGGACTGTTGTTCAACTTGTATGGGAAATTGTGTCTTGTCTTCATCCTGTGCTTGTTTAACTAAAACTGGGGGTGAATTTGCATACAATGCTCAGGGCCTACTGAAGGAAGCATTCTTGGAAGAGTGTATTGCCATTAGTCGCAATCCTCAGCAACATTTCTTCTATTGCAAAAATTGCCCACTTGAAAGATCTATGAGTGATGGTTGTTTGGAACCATGTAAGGGACACTTAAAGAGAAAGTTTATTAAAGAATGTTGGAGCAAATGTGGCTGTGGGAGACAGTGTGGCAATCGGGTTATCCAGCAAGGAATAACTTGCAAGTTGCAGGTATTTTTCACTTCAGAAGGAAAAGGATGGGGTCTTCGTACCTTAGAGGATCTGCCAAAAGGTGCATTTGTGTGTGAGTTTATTGGAGAAATTTTATCCATTCAAGAGTTGCATGAGAGGAACATGAAATGCACTGAAAATGGGAAATATACATACCCTGTTATACTGGATGCTGATTGGGATTCAGGATATGTGAAGGATGAAGAAGCTCTATGCTTGGATGCAGCTTCCTTTGGCAACACTGCTAGGTTTATCAATCACAGATGTTCTGATGCAAACTTGATTGAGATCCCAGTCGAAGTTGAGTATCCTGATCGTTATTACTATCATTTTGCTTTTTTCACTTCGAGAAAAATATCAGCACAGGAAGAGCTAACATGGGACTATGGCATTGACTTTGATGACAATGATCATCCCGTCAAGCTGTTCCAGTGCAGATGTGGCAGTAAATTCTGCAGGAACATTAAGAGATCGAATAGATCTCTTAGATCTGCGTCAATTTCAGGATGA 2670 0.4187 LPPRENQKTCSAFRRNAAPNVSPSFLSSSPPLLIPSVVARSRFNDVVSPEEQQFFFFRRLHSLFFLSVLIAGVSIQASTERALAACRAMSSLGIDDSKVKSVLKKLLKVYDKNWELIEAENYRVLADAIFEDDDNVVHEPKKRSQTADVHNPRHSLSPSFTNHQEAEAEVEEAQMHILTARPLKRLRLQGQESQPLHSLTNSAPSPSSKKLKLEDAGKKPQNKPVSSGGNPRDEACPLPPQDGIVDKGKQPASPQVSHRGRRLTSERESPSKEPTVEPGKFLLPNKQIPRIHTLIIPKDEPIDELPDYEMPIAVIPPEPSSARGSRMKNGVAGKLSGHVNVTSSERRDGVRDEDVVPTSNEEENCNVEIASSTLGGVKLSLSCSSAHRGSHFQMPTRDQLIEMMEDKCLRSYKITDPNFSVMKLLRDICDCMSEFTNDSIDESQEGSMISSSVDALKESQAPGTPCVVGNKDLDMPSHISNGSINVKSSDDSVSPQSLLPLPHSNGLNDAVLLSKIDKTNDFSQSNVRNELEDPMSPNSHSLVVVPPNQFTADDIRSFHDANDLTKGEENVEIPWVNETTNDFTPSFNYIPQNLVFRDAYVNISLSRIGSEDCCSTCMGNCVLSSSCACLTKTGGEFAYNAQGLLKEAFLEECIAISRNPQQHFFYCKNCPLERSMSDGCLEPCKGHLKRKFIKECWSKCGCGRQCGNRVIQQGITCKLQVFFTSEGKGWGLRTLEDLPKGAFVCEFIGEILSIQELHERNMKCTENGKYTYPVILDADWDSGYVKDEEALCLDAASFGNTARFINHRCSDANLIEIPVEVEYPDRYYYHFAFFTSRKISAQEELTWDYGIDFDDNDHPVKLFQCRCGSKFCRNIKRSNRSLRSASISG 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0965 889 Pfam SET domain 729 850 IPR001214 GO:0005515
Aed8g0965 889 SMART set_7 717 856 IPR001214 GO:0005515
Aed8g0965 889 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 439 886 - -
Aed8g0965 889 SUPERFAMILY SET domain 557 859 IPR046341 -
Aed8g0965 889 MobiDBLite consensus disorder prediction 343 362 - -
Aed8g0965 889 Pfam Pre-SET motif 565 709 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aed8g0965 889 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 79 376 - -
Aed8g0965 889 MobiDBLite consensus disorder prediction 344 358 - -
Aed8g0965 889 Pfam Ubiquitin-binding WIYLD domain 78 135 IPR018848 GO:0018024
Aed8g0965 889 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 53 889 IPR025776 -
Aed8g0965 889 ProSiteProfiles SET domain profile. 717 850 IPR001214 GO:0005515
Aed8g0965 889 MobiDBLite consensus disorder prediction 140 170 - -
Aed8g0965 889 Gene3D - 70 135 IPR043017 -
Aed8g0965 889 ProSiteProfiles Pre-SET domain profile. 613 714 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aed8g0965 889 Gene3D SET domain 551 860 IPR046341 -
Aed8g0965 889 MobiDBLite consensus disorder prediction 192 281 - -
Aed8g0965 889 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 79 376 - -
Aed8g0965 889 SMART preset_2 561 701 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aed8g0965 889 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 439 886 - -
Aed8g0965 889 CDD SET_SETDB-like 585 850 - -
Aed8g0965 889 MobiDBLite consensus disorder prediction 260 274 - -
Aed8g0965 889 MobiDBLite consensus disorder prediction 192 208 - -
Aed8g0965 889 MobiDBLite consensus disorder prediction 150 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0965 Aed-Chr8 8403907 8409930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0965 693 875 C2H2 Transcription Factor Family AT2G23740 42.328 1.38e-31 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aed8g0965 Pre-SET 6.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0965 - - gmx:100778335 1342.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0965 8 8403907 8409930 Aed8g0965 8 8403907 8409930 ECH
Aed8g0965 8 8403907 8409930 Aed4g0133 4 981677 988652 PCT