Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0960 ATGGCCATGATCAGTGCAGCCTCAACCACTGGCTCTCACTCCCGAAATGGATTCCGTTTCTCAAAAGAGGAAAATGGAGATTTCAATCAACAGCAGTGGCAACACAATGATGATCAAGCATTCTCTGCAGCTAGAAGTGTTGCTAATGAGGATTTTGAAGGGCAGAAAGCATACTACAGCAATGCAGAGAAACGGAAAGAGAAGAGAAGTTTAATGAGCAATGACCAAGGAGAAGATGACCACCTTTTGGCAGAGTCAAGGCAACCATTGTGGCGCAAGGTTCCAATATCTTCAAGCCTAATCAACCCTTACCGCATAGTCATAATCGCACGTCTCATTATCCTGATTTTCTTCTTCCACTTGCGAATTACAACTCCAGTGCATGATGCACTTGCCTTATGGATAATATCAGTAGTCTGTGAAATCTGGCTTGCATTGTCTTGGCTAGTAGACCAAGTCCCCAAGTGGTTCCCCATTACCCGCGAAACTTACCTTGAACGTTTGTCGTTAAGGTTTGAGCGTGAAGGGGATAATGAGCCAAACCTTCTAGCCTCAGTTGATATCTTTGTGACCACTGCAGACCCTTCTAAGGAACCACCTATTACAACCGCGAACACGGTTCTGTCAGTGTTGTCTGTTGATTATCCTGTTGAGAAGGTTAGCTGCTATGTCTCAGATGACAGTGCATCTTTGCTTCTCTTTGATACCTTGTCAGAAACTGCTGAGTTTGCTAGAATATGGGTTCCTTTTTGTAACAAGTATAACATTGAGCCAAGGGCACCTGAGTTTTATTTCTCTCAAAAACTTGATTACTTGAAAGACAAGGTTCACCACACATTTGTTAAGGATCGCAGGGCCATGAAGAGAGAGTATGAAGAATTCAAGGTGAAAATTAATGTATTGGTTGCAAAGGCTCAGAAAAAACCAGAAGAGGGGTGGGTGATGCAAGATGGTAATCCATGGCCTGGGAATAACATTGATGATCATCCAGGAATGATTCAGGTATGTCTAGGAAGTGCTGGTGTACTGGACATAGAAGGCAAGGAACTGCCAAGGCTTGTGTATGTTTCACGGGAAAAACGTCCCGGCTATCAACACCACAGTAAAGCTGGAGCCATGAATGCTCTGGTTCGAGTTTCTGCTGTGCTTAGCAATGCACCTTTTGCATTGAATCTGGACTGTGACCAATACATCAATAATAGCAAGGTTCTTAGGGAGGCTATGTGCTTTTTAATGGATCCCCAAATTGGAAAGAAGTTCTGTTATGTCCAATTTCCACGAAGGTTTGATGGCATTGATTGCAATGACAGATATGCTAATCACAATACTGTCTTCTTTGATATCAACATGAAATGCCTGGATGGGATTCAAGGTCCTATGTATGTTGGTACTGGATGTGTGTTCAACAGGCAGGCATTATATGGTTTTGAGCCACCTTCTGATAAAAGGCCAAAGATGAAGAGTTGTTGTACCTGGCCTTCATGCTGCTGCAGCTGTTGTTCTGGGGACTCTGAGTCGTCTGCATCTGATGACAAGGAGACCGATCAAGAGCTTGAGGACTTTGATGAGGAAGAGGAGGAATTATTACCCTTCATGTCCCTGAAAAGTTTAGAGAAACGGTTTGGACAATCACCAGTTTTCATTTCATCTGCTTTGATGGAAGATGGTGGACTTCCAAAAGGAACCAATGCTCAATTGCTCATTAAGGAAGCAATTCATGTTATAAGCCGTGACTATGAAGAGAAAACTGAATGGGGAAAAGAGGTAATCCAAGGATGGAAATCAGTGTACTGCATGCCAAAGAAAGCAGCTTTCAAGGGATCTGCTCCTATAAATCTATCAGACCGATTACACCAAGTTCTGAAATGGGCTTCGGGTTCTACTGAGATTTTCTTTAGTGGCTATTGCCCTTTGTGGTATGGCTATAGTGGAAAACTGAAATGGCTGCAGAGATTGGCCTACACTAATTCTGTTGTCTATCCATTCACTTCCATCCCTCTGCTGATCTACTGTACAATTCCAGCTGTCTGTCTTCTGACTGGAAAGTTCATCATCCCCACTCTGTCAAACCTTGCTAGCATTTGGATAATGGCCTTATTTATCTCCATCATCTTAACCTGTGTGCTAGAGCTTCGCTGGAGTGGGGTTAGTATTCAGGACTGGTGGCGCAATGAGCAATTCTGGGTCATTGGGGGAGTTTCTGCACACCTCTTTGCTGTATTTCAAGGTCTCCTTAAAGTTGGTGGAGTACACACTAACTTCACTGTGAGAGCAAAATCAGCAGCAAATGACACTGCATTTGGACAGCTCTATCTCTTCAAGTGGACTACTCTTCTCATCCCACCAACGAGTCTTGTAATCTTAAACATGGTGGGAATTGTAGCTGGAATCTCTGATGCCATTAACAATGGCTATGTCTCATGGGGACCTTTCTTTGGGAAGCTTTTCTTCTCCTTGTGGGTCATTTTGCACTTATATCCTTTCCTCAAAGGTTTATTGGGAAGGCAAAACAGAACCCCTACCATTGTAGTCCTATGGTCAATACTTGTAGCCATAGTTTTCTCAATGATTTGGGTGAGAATTGATATTTTCTTGCCCAAGCAGACAGGTCCAGCACTCAAACAATGTGGGATAAGATGCTAA 2643 0.4321 MAMISAASTTGSHSRNGFRFSKEENGDFNQQQWQHNDDQAFSAARSVANEDFEGQKAYYSNAEKRKEKRSLMSNDQGEDDHLLAESRQPLWRKVPISSSLINPYRIVIIARLIILIFFFHLRITTPVHDALALWIISVVCEIWLALSWLVDQVPKWFPITRETYLERLSLRFEREGDNEPNLLASVDIFVTTADPSKEPPITTANTVLSVLSVDYPVEKVSCYVSDDSASLLLFDTLSETAEFARIWVPFCNKYNIEPRAPEFYFSQKLDYLKDKVHHTFVKDRRAMKREYEEFKVKINVLVAKAQKKPEEGWVMQDGNPWPGNNIDDHPGMIQVCLGSAGVLDIEGKELPRLVYVSREKRPGYQHHSKAGAMNALVRVSAVLSNAPFALNLDCDQYINNSKVLREAMCFLMDPQIGKKFCYVQFPRRFDGIDCNDRYANHNTVFFDINMKCLDGIQGPMYVGTGCVFNRQALYGFEPPSDKRPKMKSCCTWPSCCCSCCSGDSESSASDDKETDQELEDFDEEEEELLPFMSLKSLEKRFGQSPVFISSALMEDGGLPKGTNAQLLIKEAIHVISRDYEEKTEWGKEVIQGWKSVYCMPKKAAFKGSAPINLSDRLHQVLKWASGSTEIFFSGYCPLWYGYSGKLKWLQRLAYTNSVVYPFTSIPLLIYCTIPAVCLLTGKFIIPTLSNLASIWIMALFISIILTCVLELRWSGVSIQDWWRNEQFWVIGGVSAHLFAVFQGLLKVGGVHTNFTVRAKSAANDTAFGQLYLFKWTTLLIPPTSLVILNMVGIVAGISDAINNGYVSWGPFFGKLFFSLWVILHLYPFLKGLLGRQNRTPTIVVLWSILVAIVFSMIWVRIDIFLPKQTGPALKQCGIRC 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0960 880 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 6 880 - -
Aed8g0960 880 Pfam Cellulose synthase 186 874 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aed8g0960 880 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 6 880 - -
Aed8g0960 880 MobiDBLite consensus disorder prediction 23 42 - -
Aed8g0960 880 MobiDBLite consensus disorder prediction 1 42 - -
Aed8g0960 880 MobiDBLite consensus disorder prediction 1 16 - -
Aed8g0960 880 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 291 477 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0960 Aed-Chr8 8358963 8364013 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0960 75 880 Cell Wall Biosynthesis AT5G17420 67.110 0.0 1169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0960 K10999 - gmx:100777278 1596.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0960 8 8358963 8364013 Aed8g0960 8 8358963 8364013 ECH