Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0946 ATGGAGCATGTGATTGGTGGCAAGTTTAAGCTGGGAAGGAAAATTGGGAGTGGGTCTTTTGGGGAGCTCTATTTGGGTGTTAATGTACAAACTGGAGAGGAGGTGGCTGTTAAGCTGGAACCTGTGAAGACCAGGCATCCACAGCTTCACTATGAGTCAAAACTGTATATGCTTCTTCAAGGAGGAACGGGGATTCCCCACCTCAAGTGGTTTGGAGTTGAGGGAGACTACAATGTCATGGTTATCGACCTTCTTGGACCAAGTCTGGAAGATTTATTCAATTATTGCAACCGGAAGTTCACATTGAAGACAGTGTTGATGCTTGCTGATCAATTGATTAACAGAGTTGAATATATGCATTCAAGAGGTTTCCTTCACCGTGACATAAAGCCAGACAATTTTTTAATGGGTCTAGGACGAAAAGCAAATCAAGTGTATGCCATTGACTATGGCCTTGCAAAAAAATATAGGGATCTTCAGACTCATAGGCACATACCGTACAGGGAAAACAAGAACCTTACAGGCACAGCACGCTATGCAAGTGTCAACACTCATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTATGTGCTCATGTATTTCTTAAGAGGAAGTCTTCCCTGGCAGGGACTGAAGGCCGGCACCAAAAAACAAAAATATGATAAAATCAGTGAGACAAAGGTGTCAACTCCCATAGAGGGGCTCTGCAAATCATATCCCCCTGAGTTTGTATCATACTTCCACTACAGCCGATCTCTGCAATTTGAGGACAAGCCAGATTATTCGTATTTAAAGAGACTTTTCAGAGACCTATTTATTCGAGAAGGCTACCAGTTTGATTACATTTTTGACTGGACTATGTTAAAGTATCCACAGATCAGTGGCAGCTCCAGAGGGCGGCAAGGCACTGGCAAGGCAGCTATGCCGCCAGGTCCACATTTACAAAAAGCAGAAAAGATCTCAGTTGGGAAAGAGATTCGAGAGAAATTCTCTGGTGCAGTTGAAGCATTCTCCCGGAGGAACCCTGCAAATGCTAGTCCTCGTGCTGATCACACCAAACATAGGAGTTTTGAGGATGTACCAGTTCAAAAGGATATGCACTATGGGCAGCAACAGCAACACAATGCCACTCGATATGGGAGCAGTTCAAGAAGAGCCATGATCACATCAAACAAGCCGGTAACCTCAGGTGACCATACTACTGGCAGGCAGACCTTATCCGGGAACCGTCCATCCGGTGCTCACAGAGTTCAACCTGTGTACGACACCAAACAAGCAGTGACTTATACGCGCAGTGGCTCTATAAGAGGCCAACGTGATGATCCTCTAAGGAGCTTTGAGCACCTCAACATCAGGAAGTAG 1377 0.4503 MEHVIGGKFKLGRKIGSGSFGELYLGVNVQTGEEVAVKLEPVKTRHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFTLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYAIDYGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISETKVSTPIEGLCKSYPPEFVSYFHYSRSLQFEDKPDYSYLKRLFRDLFIREGYQFDYIFDWTMLKYPQISGSSRGRQGTGKAAMPPGPHLQKAEKISVGKEIREKFSGAVEAFSRRNPANASPRADHTKHRSFEDVPVQKDMHYGQQQQHNATRYGSSSRRAMITSNKPVTSGDHTTGRQTLSGNRPSGAHRVQPVYDTKQAVTYTRSGSIRGQRDDPLRSFEHLNIRK 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0946 458 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 442 - -
Aed8g0946 458 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Aed8g0946 458 Gene3D Transferase(Phosphotransferase) domain 1 1 334 - -
Aed8g0946 458 MobiDBLite consensus disorder prediction 436 458 - -
Aed8g0946 458 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0946 458 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Aed8g0946 458 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0946 458 MobiDBLite consensus disorder prediction 395 417 - -
Aed8g0946 458 MobiDBLite consensus disorder prediction 395 422 - -
Aed8g0946 458 PANTHER CASEIN KINASE-RELATED 1 442 - -
Aed8g0946 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Aed8g0946 458 MobiDBLite consensus disorder prediction 442 458 - -
Aed8g0946 458 MobiDBLite consensus disorder prediction 301 322 - -
Aed8g0946 458 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0946 458 MobiDBLite consensus disorder prediction 338 360 - -
Aed8g0946 458 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0946 Aed-Chr8 8241677 8249745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0946 8 213 MAP Kinase Kinase Kinase AT3G06030 25.463 2.10e-13 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Aed8g0946 Pkinase 4.6e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0946 K08960 - gmx:100789031 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0156 4 1123025 1129594 Aed8g0946 8 8241677 8249745 PCT