Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0944 ATGGATTCTGCAAGGAGTTGGCTTCAGAAGTTCCAGCCTCGAGATAAAGCCAGGGCTGCTGGGAAGAAAAAGGAGGAGGATAGTAATAGAGGAAACCAGGATTTGAATGAAGCTGCCGCCGTCGATGAAGCATTGCTTTCCAGTGTCACGAAGCAGAAGGTGGCAGCAGCAAAGCAGTACATTGAAAACCATTACAAGGAGCAAATGAAAAACCTTCAGGAGAGGAAGGAGCGTCGAACCATCTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCTGAGGAGGATCAAAACAACCTGCTTAAGTTTTTAGAGAAAAAGGAAACCGAATACATGCGCCTTCAGAGGCATAAGATGGGTGTTGAAGATTTTGAGTTATTGACAATGATTGGAAAAGGTGCATTTGGGGAGGTCAAAGTCTGTAGGGAGAAAACTAGTGGTCATGTATATGCAATGAAGAAACTGAAAAAATCAGAGATGCTTCGCAGAGGCCAGGTTGAGCATGTTAAAGCTGAAAGGAATCTCCTCGCAGAGGTTGACAGCAATTGCATAGTCAAGCTTTATTGTTCTTTCCAGGATGATGAATATCTGTATCTTATTATGGAGTATCTACCGGGTGGGGATATGATGACTCTACTTATGAGAAAGGATACTTTGACTGAAGATGAAGCCAGATTTTATGTAGGAGAAACAGTTTTGGCGATTGAATCTATACATAAGCACAATTATATACATAGAGATATCAAGCCAGACAACTTATTACTTGATAGATATGGACACTTAAAATTGTCAGATTTTGGACTTTGTAAACCATTAGATTGTAGTACACTTGAAGAAAAGGATTTTTCTGGGGGTCAGAATGCTTATTCCACAGTTGGTACCCCAGATTATATTGCTCCAGAAGTTCTTTTGAAGAAAGGTTATGGGATGGAATGTGATTGGTGGTCACTTGGAGCTATTATGTACGAAATGTTGGTGGGATTTCCACCTTTTTATTCTGATGAACCAATGTTAACATGTAGAAAGATAGTAAATTGGAAAACTTACTTGAAATTTCCTGAAGAAGCTAGGCTATCCCCAGAAGCTAAAGATCTTATTAGTAAGCTTTTGTGTAATGTCAATCAAAGGCTGGGGTCAAATGGTGCAGATGAAATAAAGGCTCATCCATTCTTCAAAGGTGTTGAATGGGATAAGCTGTATCAAGTAGAAGCTGCATTTATTCCTGAGGTCAATGATGAGTTGGATACTCAGAATTTTGAAAAGTTTGATGAGTCTGACAGCCAAACCCAATCATCATCAAGATCTGGCCCATGGAGGAAGATGCTTTCATCTAAGGACTTGAATTTTGTTGGATACACTTACAAGAACTTTGAAATTGTCAATGATTATCAAGTTCCTGGAATGGCTGAACTGAAGAAGAAACAGTCCAAACCAAAGAGGCCAACCATCAAGTCACTTTTCGAAACACCAGAGGCATCCGTGAACGATGATGACGATCAACAACAACCTGCTCAAGGAAGCTTTTTAAAGCTCTTGCCACCCCAGATGGAGGTATCTCATAATCGCGACAAGAATCTTCCTCCCAGGGTGATGATAATTACACAAAGCAACTAA 1611 0.4029 MDSARSWLQKFQPRDKARAAGKKKEEDSNRGNQDLNEAAAVDEALLSSVTKQKVAAAKQYIENHYKEQMKNLQERKERRTILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVEDFELLTMIGKGAFGEVKVCREKTSGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHLKLSDFGLCKPLDCSTLEEKDFSGGQNAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGFPPFYSDEPMLTCRKIVNWKTYLKFPEEARLSPEAKDLISKLLCNVNQRLGSNGADEIKAHPFFKGVEWDKLYQVEAAFIPEVNDELDTQNFEKFDESDSQTQSSSRSGPWRKMLSSKDLNFVGYTYKNFEIVNDYQVPGMAELKKKQSKPKRPTIKSLFETPEASVNDDDDQQQPAQGSFLKLLPPQMEVSHNRDKNLPPRVMIITQSN 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0944 536 PANTHER SERINE/THREONINE-PROTEIN KINASE 285 530 - -
Aed8g0944 536 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 277 - -
Aed8g0944 536 Gene3D Phosphorylase Kinase; domain 1 94 419 - -
Aed8g0944 536 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 285 530 - -
Aed8g0944 536 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 277 - -
Aed8g0944 536 Coils Coil 65 85 - -
Aed8g0944 536 CDD STKc_NDR_like 121 454 - -
Aed8g0944 536 MobiDBLite consensus disorder prediction 1 35 - -
Aed8g0944 536 ProSiteProfiles AGC-kinase C-terminal domain profile. 391 463 IPR000961 GO:0004674|GO:0005524|GO:0006468
Aed8g0944 536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Aed8g0944 536 ProSiteProfiles Protein kinase domain profile. 123 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0944 536 MobiDBLite consensus disorder prediction 9 32 - -
Aed8g0944 536 MobiDBLite consensus disorder prediction 422 437 - -
Aed8g0944 536 Pfam Protein kinase domain 124 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0944 536 ProSitePatterns Protein kinases ATP-binding region signature. 129 152 IPR017441 GO:0005524
Aed8g0944 536 Gene3D Transferase(Phosphotransferase) domain 1 207 410 - -
Aed8g0944 536 MobiDBLite consensus disorder prediction 418 437 - -
Aed8g0944 536 SUPERFAMILY Protein kinase-like (PK-like) 96 444 IPR011009 -
Aed8g0944 536 MobiDBLite consensus disorder prediction 487 527 - -
Aed8g0944 536 SMART pkinase_C_6 391 455 IPR000961 GO:0004674|GO:0005524|GO:0006468
Aed8g0944 536 SMART serkin_6 123 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0944 536 Pfam Protein kinase C terminal domain 409 453 IPR017892 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0944 Aed-Chr8 8217220 8227645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0944 1 523 AGC Kinase Gene Family AT3G23310 71.634 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Aed8g0944 Pkinase 4.7e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0944 K08790 - gmx:100779528 973.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0944 8 8217220 8227645 Aed8g0944 8 8217220 8227645 ECH
Aed8g0944 8 8217220 8227645 Aed4g0157 4 1136185 1140757 PCT