Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0931 ATGCCGTCGATACTCTCTCCGGGGAAAATCCACTCCCTGGAGGTGGAGAATTTCAAGTCCTACAAGGGCTTCCAGGTGATAGGTCCCTTCTACGACTTCACCGCCATCATCGGCCCCAACGGCGCGGGGAAGTCCAACCTCATGGACGCCATCAGCTTCGTCCTCGGCGTCCGCACCGGGCAGCTCCGCGGCGCGCAGCTCAAGGACCTCATCTACGCCTTCGACGACCGCGAGAAGGAGCAGAAGGGACGCCGGGCCTTCGTCCGCCTCGTCTACCACCTCGCTAACTCCGCCGAGATCAAGTTCACCCGCACCATCACCAGCGCCGGCGCCAGCGAGTACCGCATCGACGAGTCCCTCGTCAATTGGGAGACATACAACAACAGGCTCAAGTCCCTCGGCATTCTCGTCAAAGCTCGCAATTTCTTGGTCTTTCAGGGTGACGTGGAGTCTATTGCGTCGAAGAATCCCAAAGAACTCACTGCACTGGTGGAGCAGATATCCGGCTCTGATGAGTGCAAGAGAGACTATGAGCAGTTTGAGGAGGAAAAAGGTGCTGCAGAGGAAAAATCAGCACTTGTTTATCAGAAAAAGAAGACAGTGGTTATGGAGAGAAAGCAGAAGAAAGAACAGAAGGAAGAAGCAGAGAAGCATCTCCGCCTGCAACAAGAACTGAAATCTATGAAGGGAGAACATTTCTTGTGGCAGTTGTTTAATATTCACAACGATTATGCTGAAACAATTAAGGATCTTGAAGATGAGGAAGAAAGTCGTCAAGGTGTTGTTAAAGAACTAGAACATTTTGAAAATGAAGCTAGTAAAAAGAAAAAAGAGCAGGCCAAATATCTGAAAGAGATTGCACTACGTGAAAAGAGAATTGCTGAGAAAAGCAACAAGCTTGACAAGAGTCAACCTGAGCTTCTGAAGTTAAAGGAGGAAATGACTCGTATCACTTCAAAAATTAAAAAAGGGAAGAAAGAGCTTGATAAAAAAAAGGTTGAACGGACGAAGCATGATGCTGATATAGCATTACTACGGAAAGACGTCCAGGATCTTACAGCAAAAATGGAAGACCTTCAGGAAAAGGGACAAGATGTTGATGAGGAGCTTGATTTGCAAGGCAAGGTCTTGGACGAATATTTTCGCATCAAACATGAAGCTGGGATGAAAACTGCAAAGCTTAGAGAGGAAAAGGAGCTTCTAGATAGGAAACTAAACGCTGATAGTGAAGCTCAAAAGAATTTGGAAGAGAATCTTCAACAGTTACGAAACAGGGAGTCTGAACTGAATTCACAGGAAGAACAGATGCGGGCAAGGCTGGAAAAAATTCTTGATAATTCTTCAAAAAATAAAGTTGGCCTTGAAAACTTGAAAAAAGAACTACGCATGATGCAGGACAAACATCGTGATTCCAAGAAAAAATATGAAAATTTGAAGTTAAAAATTGGTGAATTAGAAAATCAACTACGTGAATTGAAGGCTGATAGATATGAAAATGAGCGAGATGTTAGGTTGTCTCAGGCTGTTGAGACTCTGAAACGTCTGTTTCAAGGAGTTCATGGTCGCATGACTGACCTTTGTAGGCCAACACAGAAGAAGTATAACCTAGCTGTTACTGTTGCTATGGGTAGATTTATGGATGCAGTCGTAGTTGATAATGAAAAGACTGGGAAGGAATGCATCAAGTATTTAAAAGATCAGAGGCTTCCTCCCCAAACATTTATTCCTCTGGAATCAGTTCGGGTGAAGCCAATAATGGAAAGATTGCGCACATTAGGGGGTACTGCAAAACTGGTCTTTGACGTGATTCAATATCCTTTTTCTCTATGCAAGTTTGATCCCTCCTTGGAGAAGGCAATTCTCTTTGCTGTTGCGAATACTCTTGTTTGTGATGATCTTGAGGAGGCCAAAATTTTAAGCTGGAGTGGTGAGAGGTTTAAAGTTGTAACTGTGGACGGAATTCTGTTGACAAAATCCGGCACAATGACTGGGGGCACTAGTGGTGGAATGGAAGCAAGGTCAAAACAGTGGGATGACAAGAAAATTGAAGGACTTAATAAAAAGAAAGAGCAGTATGAATCAGAAATAGAAGAGCTAGGATCAATAAGAGATATGCACCTTAAAGAGTCTGAAGCATCTGGAAAAATTAGTGGGCTTGAGAAGAAAATTCAATATGCTGAGATTGAAAAGCGAAGCATTGAAGATAAACTTTCAAATTTGAGCCAAGAAAAAAAGACCATCAAAGAGAGAATTGAATGCATCAGTCCAGATCTACAGAAGTTAAATGATGCTGTTAACAAGAGCAATGCAGATGTACGTAAGCTTGAGAAGAGGATAAATGAAATTACTGATATGATATACAGTGACTTCAGCAAGTCAGTTGGGGTAGCAAACATCCGTGAGTATGAAGAAAATAGACTCCAGGCTGCTCAGAGTATAGCAGACGAGAGGGTGCACCTGAATACCCAACTTTCTAAATTAAAATATCAGTTGATGTATGAGCAAGATCGGGATATGAGTTCACGAATTCAAGAAATGGAAGCTTCTCTTGGTGGTTTAGAGAAAGATTTAAAACGCGTACAGGACAGAGAGGCTGCAGCGAAGTTAGCAGCCGAAAATGCTACTGAAGAGATTAATCAGCTTAAGGAAGAAGCTAAAGAGTGGAAATCAAAGTCAGAGAATTGTGAAAAGGAAATCCAAGAGTGGAAGAAGAAAGCTTCTGCAGCCACAACAAACATATCCAAACTTAATCGTCTGATACACTCTAAGGATGCACAGACTGAGCAGTTGAATGTGCAAAAGCAGGAAATATTAGAAAAGTGTGAACTAGAACAGATTAACCTCCCGATCATATCAGATCCTATGGATACTGGTAGCTCAGAACCAGGTCCATCTTTTGACTTTGATCAACTAAGTAGGGCACTGAAAGATAGAAGACACTCAGACAGGGATAAAATTGAGGCAGAGTTCAAGCAAAAAATGGATGCCTTGATATCTGAGATTGAAAGAACAGCACCAAATTTGAAGGCATTGGACCAATATGAAGCTCTGCTAGAAAAAGAAAGAGCTGTAACTGAAGAGTTTGAAGCTGTCAGGAAAGAGGAGAGGGAAAAAACTCAGAGATTCAATGAGGTTAAGCAGAGAAGGTACCAGTTGTTCATAGATGCTTTCACCCATATATCTGGTAATATAGATAAAATTTACAAACAACTTACGAAAAGCAACACACATCCACTGGGGGGAACAGCATACCTAAACTTGGAAAATGATGATGATCCATTTTTACATGGCATCAAGTACACTGCTATGCCCCCAACAAAGCGCTTCCGTGATATGGAACAGCTATCCGGTGGGGAAAAGACAGTAGCTGCACTTGCATTGCTATTCTCTATCCACAGTTATAAGCCTTCACCATTTTTTATATTGGACGAAGTTGATGCTGCATTGGACAACATGAATGTTGCCAAGGTTGCTGGCTTTATTCGTTCAAAATCTTGTGAAGGAGCAAGGACTAGTCAAGATGCTGATGGTGGAAATGGTTTTCAGAGTATTGTGATATCACTGAAAGACACCTTTTATGACAAAGCCGAAGCATTAGTTGGGGTTTACAGAGACTCTGAAAGAGGCTGTTCGAAAACTCTCACATTTGATTTGACTAAATTCCGAGAGCCCTAA 3675 0.4223 MPSILSPGKIHSLEVENFKSYKGFQVIGPFYDFTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGAQLKDLIYAFDDREKEQKGRRAFVRLVYHLANSAEIKFTRTITSAGASEYRIDESLVNWETYNNRLKSLGILVKARNFLVFQGDVESIASKNPKELTALVEQISGSDECKRDYEQFEEEKGAAEEKSALVYQKKKTVVMERKQKKEQKEEAEKHLRLQQELKSMKGEHFLWQLFNIHNDYAETIKDLEDEEESRQGVVKELEHFENEASKKKKEQAKYLKEIALREKRIAEKSNKLDKSQPELLKLKEEMTRITSKIKKGKKELDKKKVERTKHDADIALLRKDVQDLTAKMEDLQEKGQDVDEELDLQGKVLDEYFRIKHEAGMKTAKLREEKELLDRKLNADSEAQKNLEENLQQLRNRESELNSQEEQMRARLEKILDNSSKNKVGLENLKKELRMMQDKHRDSKKKYENLKLKIGELENQLRELKADRYENERDVRLSQAVETLKRLFQGVHGRMTDLCRPTQKKYNLAVTVAMGRFMDAVVVDNEKTGKECIKYLKDQRLPPQTFIPLESVRVKPIMERLRTLGGTAKLVFDVIQYPFSLCKFDPSLEKAILFAVANTLVCDDLEEAKILSWSGERFKVVTVDGILLTKSGTMTGGTSGGMEARSKQWDDKKIEGLNKKKEQYESEIEELGSIRDMHLKESEASGKISGLEKKIQYAEIEKRSIEDKLSNLSQEKKTIKERIECISPDLQKLNDAVNKSNADVRKLEKRINEITDMIYSDFSKSVGVANIREYEENRLQAAQSIADERVHLNTQLSKLKYQLMYEQDRDMSSRIQEMEASLGGLEKDLKRVQDREAAAKLAAENATEEINQLKEEAKEWKSKSENCEKEIQEWKKKASAATTNISKLNRLIHSKDAQTEQLNVQKQEILEKCELEQINLPIISDPMDTGSSEPGPSFDFDQLSRALKDRRHSDRDKIEAEFKQKMDALISEIERTAPNLKALDQYEALLEKERAVTEEFEAVRKEEREKTQRFNEVKQRRYQLFIDAFTHISGNIDKIYKQLTKSNTHPLGGTAYLNLENDDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNMNVAKVAGFIRSKSCEGARTSQDADGGNGFQSIVISLKDTFYDKAEALVGVYRDSERGCSKTLTFDLTKFREP 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0931 1224 Coils Coil 342 369 - -
Aed8g0931 1224 Coils Coil 1014 1034 - -
Aed8g0931 1224 Gene3D - 578 667 - -
Aed8g0931 1224 Coils Coil 170 190 - -
Aed8g0931 1224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 1165 IPR027417 -
Aed8g0931 1224 Gene3D - 497 577 - -
Aed8g0931 1224 Coils Coil 398 450 - -
Aed8g0931 1224 PIRSF SMC 8 1223 IPR024704 GO:0005524|GO:0016887
Aed8g0931 1224 Pfam SMC proteins Flexible Hinge Domain 517 639 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Aed8g0931 1224 Gene3D - 8 230 IPR027417 -
Aed8g0931 1224 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 9 1224 - -
Aed8g0931 1224 Coils Coil 758 785 - -
Aed8g0931 1224 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER 9 1224 - -
Aed8g0931 1224 CDD ABC_SMC1_euk 1103 1218 IPR028468 GO:0005524|GO:0007062|GO:0008278|GO:0016887
Aed8g0931 1224 SMART SMC_hinge_2 517 640 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Aed8g0931 1224 Coils Coil 682 702 - -
Aed8g0931 1224 Coils Coil 198 228 - -
Aed8g0931 1224 CDD ABC_SMC1_euk 10 157 IPR028468 GO:0005524|GO:0007062|GO:0008278|GO:0016887
Aed8g0931 1224 Coils Coil 307 327 - -
Aed8g0931 1224 Pfam RecF/RecN/SMC N terminal domain 10 1205 IPR003395 -
Aed8g0931 1224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 872 1207 IPR027417 -
Aed8g0931 1224 Gene3D - 854 1223 IPR027417 -
Aed8g0931 1224 Coils Coil 454 502 - -
Aed8g0931 1224 Coils Coil 843 919 - -
Aed8g0931 1224 SUPERFAMILY Smc hinge domain 481 689 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Aed8g0931 1224 Coils Coil 716 750 - -
Aed8g0931 1224 Coils Coil 251 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0931 Aed-Chr8 8019756 8037182 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0931 8 114 Structural Maintenance of Chromosomes family AT5G61460 32.456 1.44e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0931 K06636 - gmx:100785315 2177.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0931 8 8019756 8037182 Aed8g0931 8 8019756 8037182 ECH