Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0922 ATGGCCCCTTTCGACCGTTTCGTTTCTTATTACGAAATTCAATTCAACACTCGCGCGAAATCATTCCATTGGGAAGACTTTCTCTTCTTCAATGAAGAAAACACCACCCCCTCCTTCACAATCACTCATGAAAACTCCTCATCACAATCACAATCACACTCACAAATCAAGGAATCATCATCCTCAGATTATTCCAACTCTTCAGGCTCTTTGGTCAGCACTGAGTACTCACAACTAGAAGTGTCATCCAATTTATCTCAAGCACAAGCACAAGCACTCATGAAAGAAACACATGCATCACCAACAAAGGAATCAACAAACAAAGACAAAGACAAAAGACCCTACAGAGGAGTGAGGAGAAGACCATGGGGCAAATTTGCTGCTGAAATAAGAGACTCAACAAGAAATGGTGTTAGAGTTTGGATTGGAACATTTGACACAGCTGAAGCAGCAGCACTGGCTTATGACCAAGCTGCTTTGTCCACGAGAGGGTCCATGGCAGTGCTCAATTTCCCAGAAGAAGTGGTGAGGGAATCACTCAAAGACATGGCCAATAAGCCATGGGAAGATGGTTCCTCTCCAGTGTTGGCTCTCAAGAGAAAACACACCATGAGGAGAAAATCCAAAGCCACCACAAACAAAAAAACCAAAAGGGACCATCAATATGTAGAACAAAATGTGATTATTTCACCACAAAATGTGCTGGTCTTGGAGGATTTAGGCTCTGAGTACTTGGAGCAACTTCTCAGCTTGACTTCTTCTTCATGA 768 0.4284 MAPFDRFVSYYEIQFNTRAKSFHWEDFLFFNEENTTPSFTITHENSSSQSQSHSQIKESSSSDYSNSSGSLVSTEYSQLEVSSNLSQAQAQALMKETHASPTKESTNKDKDKRPYRGVRRRPWGKFAAEIRDSTRNGVRVWIGTFDTAEAAALAYDQAALSTRGSMAVLNFPEEVVRESLKDMANKPWEDGSSPVLALKRKHTMRRKSKATTNKKTKRDHQYVEQNVIISPQNVLVLEDLGSEYLEQLLSLTSSS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0922 255 Pfam AP2 domain 115 164 IPR001471 GO:0003700|GO:0006355
Aed8g0922 255 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 18 251 - -
Aed8g0922 255 MobiDBLite consensus disorder prediction 40 68 - -
Aed8g0922 255 MobiDBLite consensus disorder prediction 87 117 - -
Aed8g0922 255 Gene3D AP2/ERF domain 114 174 IPR036955 GO:0003700|GO:0006355
Aed8g0922 255 PRINTS Ethylene responsive element binding protein signature 115 126 IPR001471 GO:0003700|GO:0006355
Aed8g0922 255 PRINTS Ethylene responsive element binding protein signature 138 154 IPR001471 GO:0003700|GO:0006355
Aed8g0922 255 PANTHER DNA-BINDING DOMAIN 18 251 IPR044808 GO:0003700|GO:0009873
Aed8g0922 255 SMART rav1_2 114 178 IPR001471 GO:0003700|GO:0006355
Aed8g0922 255 CDD AP2 115 173 IPR001471 GO:0003700|GO:0006355
Aed8g0922 255 ProSiteProfiles AP2/ERF domain profile. 114 172 IPR001471 GO:0003700|GO:0006355
Aed8g0922 255 SUPERFAMILY DNA-binding domain 115 173 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0922 Aed-Chr8 7949378 7951081 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0922 101 250 AP2-EREBP Transcription Factor Family AT3G23240 60.784 7.81e-56 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed8g0922 AP2 1.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0922 K14516 - gmx:100780775 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0922 8 7949378 7951081 Aed8g0922 8 7949378 7951081 ECH
Aed4g0178 4 1298750 1299481 Aed8g0922 8 7949378 7951081 PCT