Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0921 ATGGAGGGTGGAAGTGGAACATCATCGTCTGTTTCAAATAATGGATCCAACGCTGGTGATGCTGCTAAGTATAGAGGGATTCGGAGGAGGCCATGGGGCAAGTTTGCTGCAGAGATTCGCGACCCTACGAGGAAAGGTACGAGGATTTGGCTTGGAACATTCGACACTGCGGAACAAGCCGCACGTGCTTATGATGCTGCTGCTTTTCATTTTCGCGGCCACAGGGCCATTCTCAACTTCCCTAATGAGTATCAATCTCCTAATCCGAATTCTTCTACTTTGCCTATGCCTCTAACTGCGCCTTCTCCTCCTTCTTATTCTTCTTCTAATTCTTCCACAAATGGTTTTTCTGGAGAAATTACGATGCAAGGTGATGATACTTTTGAGTTGGAGTATTTGGATAATAAGTTGCTCGAGGAACTCCTTCAGATGCAAGATAGCAGACACTTCTTCAAGTGA 459 0.4553 MEGGSGTSSSVSNNGSNAGDAAKYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFDTAEQAARAYDAAAFHFRGHRAILNFPNEYQSPNPNSSTLPMPLTAPSPPSYSSSNSSTNGFSGEITMQGDDTFELEYLDNKLLEELLQMQDSRHFFK 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0921 152 ProSiteProfiles AP2/ERF domain profile. 23 81 IPR001471 GO:0003700|GO:0006355
Aed8g0921 152 MobiDBLite consensus disorder prediction 1 19 - -
Aed8g0921 152 Gene3D AP2/ERF domain 22 82 IPR036955 GO:0003700|GO:0006355
Aed8g0921 152 SUPERFAMILY DNA-binding domain 23 82 IPR016177 GO:0003677
Aed8g0921 152 MobiDBLite consensus disorder prediction 1 25 - -
Aed8g0921 152 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Aed8g0921 152 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Aed8g0921 152 SMART rav1_2 23 87 IPR001471 GO:0003700|GO:0006355
Aed8g0921 152 PANTHER - 16 143 - -
Aed8g0921 152 Pfam AP2 domain 23 74 IPR001471 GO:0003700|GO:0006355
Aed8g0921 152 CDD AP2 22 82 IPR001471 GO:0003700|GO:0006355
Aed8g0921 152 PANTHER DNA-BINDING DOMAIN 16 143 IPR044808 GO:0003700|GO:0009873
Aed8g0921 152 MobiDBLite consensus disorder prediction 81 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0921 Aed-Chr8 7942863 7943321 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0921 22 149 AP2-EREBP Transcription Factor Family AT3G23230 55.814 2.05e-40 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed8g0921 AP2 6.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0921 - - gmx:100779173 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0179 4 1310632 1311102 Aed8g0921 8 7942863 7943321 PCT