Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0920 ATGACTTCTCCTTTCTTCAGGAACCCAGATTGGGACATGTCGCAGGACTCTTCAACAGAAATTTTGTTCGATTCAATGTCAACCAATAATGCAGTTCTTGACCCTTTCAGCGATTCTCTTTCCTTTGATATGGTTGATTTCTCCATGGTGCCAACACAAGAAAACAACAACAACAACAAAGAGGCAAAGCAATTGGTGGTGAAATCTGAAAATAAGAAAAGGTCATACATAGGTGTGAGGAAAAGGCCTTGGGGGAAATATGCAGCAGAGATCAGAGACACAACGAGGAATGGAACTAGGGTTTGGCTTGGAACCTTTGACACTGCTGAGGCTGCTGCTTTGGCTTATGATCAAGCTGCATTTTCCATGAGAGGTGATAATGCTGTACTCAATTTTCCGGTGGAAAGGGTGAAAGAGTCTTTGCAAGAGATCCAATTATATAGCTTCTGCTACAATGGCTCTTCTCCAGCACTTGCACTCAAGGAGAGGCACTGCATCCAAAGAAAATTGTCATCATCAAAAGCTGTAAAGTCTAAAGGGAAAAAAGAGACATCATCGTCTGAGGAAGTAGTACAGAAATTGTGTCATCAGGTAGTGCAATCAGTGGAGACCAGAAAGTATAAATTTTGCTACCTTCAGAAATATCAGAAATTGTTCTTTGAAGTGTTCTGA 672 0.4122 MTSPFFRNPDWDMSQDSSTEILFDSMSTNNAVLDPFSDSLSFDMVDFSMVPTQENNNNNKEAKQLVVKSENKKRSYIGVRKRPWGKYAAEIRDTTRNGTRVWLGTFDTAEAAALAYDQAAFSMRGDNAVLNFPVERVKESLQEIQLYSFCYNGSSPALALKERHCIQRKLSSSKAVKSKGKKETSSSEEVVQKLCHQVVQSVETRKYKFCYLQKYQKLFFEVF 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0920 223 SMART rav1_2 75 139 IPR001471 GO:0003700|GO:0006355
Aed8g0920 223 PANTHER DNA-BINDING DOMAIN 49 199 IPR044808 GO:0003700|GO:0009873
Aed8g0920 223 CDD AP2 76 134 IPR001471 GO:0003700|GO:0006355
Aed8g0920 223 PRINTS Ethylene responsive element binding protein signature 99 115 IPR001471 GO:0003700|GO:0006355
Aed8g0920 223 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Aed8g0920 223 Pfam AP2 domain 76 125 IPR001471 GO:0003700|GO:0006355
Aed8g0920 223 Gene3D AP2/ERF domain 74 135 IPR036955 GO:0003700|GO:0006355
Aed8g0920 223 ProSiteProfiles AP2/ERF domain profile. 75 133 IPR001471 GO:0003700|GO:0006355
Aed8g0920 223 PANTHER OS09G0572000 PROTEIN 49 199 - -
Aed8g0920 223 SUPERFAMILY DNA-binding domain 76 135 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0920 Aed-Chr8 7928764 7930205 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0920 35 174 AP2-EREBP Transcription Factor Family AT3G23240 50.694 4.73e-44 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed8g0920 AP2 8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0920 K14516 - gmx:100811486 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0920 8 7928764 7930205 Aed8g0920 8 7928764 7930205 ECH