Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0919 ATGGCTTCTTCTTCCCCTTTCTTCCAGAGCCAGTGTTGGGACATGAACATGTCGCAGGAGGAGCCTTCTTCTGAAATTTTGTTCGAATCACTGTCAAGCTATAATGCTGTTCTTGACCCTCTCCACGATTCTCTTTCCTTCGACATGGTTGACTTCCCCACAACACAAGGAAGCAACCACCACAACAACAACAACAACAACGTGGAACCACAACAACATAAGGAAATTAGGTCATACATCGGTGTGAGGAAAAGGCCTTGGGGGAAATATGCAGCAGAGATCAGAGACACAACGAGGAATGGAACTAGGGTTTGGCTTGGAACCTTTGACACTGCTGAGGCTGCTGCTTTGGCTTATGATCAAGCTGCATTTTCCATGAGAGGTGATAATGCTGTACTCAATTTTCCGGTGGAAAGGGTGAAAGAGTCTTTGCAAGAGATCCAATTATATAGCTTCTGCTGCAATGGCTCTTCTCCAGCACTTGCACTCAAGGAGAGGCACTGCATCCAAAGAAAATTGTCATCATCAAAAGCTATAAAGTCTAAAGGGAAAAAAGAGACATCATCGTCTGAGGAAGTGGTTGTGTTTGAGGACTTGGGAGTTGACTATCTTGAGCAACTTCTAAGCATATCCGATCATCCAAGTGAAAGCCCTAGCTACTACTTCAACTAA 672 0.4449 MASSSPFFQSQCWDMNMSQEEPSSEILFESLSSYNAVLDPLHDSLSFDMVDFPTTQGSNHHNNNNNNVEPQQHKEIRSYIGVRKRPWGKYAAEIRDTTRNGTRVWLGTFDTAEAAALAYDQAAFSMRGDNAVLNFPVERVKESLQEIQLYSFCCNGSSPALALKERHCIQRKLSSSKAIKSKGKKETSSSEEVVVFEDLGVDYLEQLLSISDHPSESPSYYFN 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0919 223 Pfam AP2 domain 79 128 IPR001471 GO:0003700|GO:0006355
Aed8g0919 223 Gene3D AP2/ERF domain 78 138 IPR036955 GO:0003700|GO:0006355
Aed8g0919 223 PRINTS Ethylene responsive element binding protein signature 79 90 IPR001471 GO:0003700|GO:0006355
Aed8g0919 223 PRINTS Ethylene responsive element binding protein signature 102 118 IPR001471 GO:0003700|GO:0006355
Aed8g0919 223 ProSiteProfiles AP2/ERF domain profile. 78 136 IPR001471 GO:0003700|GO:0006355
Aed8g0919 223 PANTHER DNA-BINDING DOMAIN 22 210 IPR044808 GO:0003700|GO:0009873
Aed8g0919 223 SMART rav1_2 78 142 IPR001471 GO:0003700|GO:0006355
Aed8g0919 223 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 22 210 - -
Aed8g0919 223 MobiDBLite consensus disorder prediction 52 71 - -
Aed8g0919 223 CDD AP2 79 137 IPR001471 GO:0003700|GO:0006355
Aed8g0919 223 SUPERFAMILY DNA-binding domain 79 138 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0919 Aed-Chr8 7917580 7918251 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0919 73 213 AP2-EREBP Transcription Factor Family AT3G23240 57.447 1.81e-51 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed8g0919 AP2 8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0919 K14516 - gmx:100782036 271.552