Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0916 ATGACTACTTCCTCCCCTTTGTTTCAGAATCCAGATTGGAACATGTTCCAGCAGCTGGAGCCTTCAGATCAAACTTTCTTCGATTCATTCATCTCAGACAATTCTGTTCAAGTCGGTAGTACCGTCCACGATTCATCAACAGAAGAAAACCACAACAAAACAAAGCAATTGGTGGAGAATAAGGAAATTAGGTCATACATAGGAGTGAGGAAAAGGCCTTGGGGGAAATATGCAGCAGAGATCAGAGACACAACGAGGAATGGAACTAGGGTTTGGCTTGGAACCTTTGACACTGCTGAGGCTGCTGCTTTGGCTTATGACCAAGCTGCATTTTCCATGAGAGGTGATCATGCTGTGCTTAATTTTCCTGTCAAAAGGGTGAAAGAGTCTTTGCAAGAGATCCAATTATATGGTTGGTGCAACAAAGGATGTTCGCCAGCACTTGCACTAAAGGAGAGGCACTACATGAACCGAAAACTGTCATCATCTAAAGGTAGAAAGTGTAGAGAGAAACATGAATCAGAGGCACCATGTGTGGTTGTGTTGGAAGATCTGGGTGTTGAATATCTAGAGCAACTTCTTAGCATATCGGATCAAAGTAAAAATAGAGGGGAAGAAGATTCTCCCATTGAGAATGAAATTCCATCCCTCTAG 654 0.4281 MTTSSPLFQNPDWNMFQQLEPSDQTFFDSFISDNSVQVGSTVHDSSTEENHNKTKQLVENKEIRSYIGVRKRPWGKYAAEIRDTTRNGTRVWLGTFDTAEAAALAYDQAAFSMRGDHAVLNFPVKRVKESLQEIQLYGWCNKGCSPALALKERHYMNRKLSSSKGRKCREKHESEAPCVVVLEDLGVEYLEQLLSISDQSKNRGEEDSPIENEIPSL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0916 217 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Aed8g0916 217 PRINTS Ethylene responsive element binding protein signature 89 105 IPR001471 GO:0003700|GO:0006355
Aed8g0916 217 Gene3D AP2/ERF domain 65 125 IPR036955 GO:0003700|GO:0006355
Aed8g0916 217 SUPERFAMILY DNA-binding domain 66 124 IPR016177 GO:0003677
Aed8g0916 217 ProSiteProfiles AP2/ERF domain profile. 65 123 IPR001471 GO:0003700|GO:0006355
Aed8g0916 217 PANTHER DNA-BINDING DOMAIN 32 196 IPR044808 GO:0003700|GO:0009873
Aed8g0916 217 SMART rav1_2 65 129 IPR001471 GO:0003700|GO:0006355
Aed8g0916 217 CDD AP2 66 124 IPR001471 GO:0003700|GO:0006355
Aed8g0916 217 Pfam AP2 domain 66 115 IPR001471 GO:0003700|GO:0006355
Aed8g0916 217 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 32 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0916 Aed-Chr8 7885450 7887643 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0916 55 200 AP2-EREBP Transcription Factor Family AT3G23240 57.143 1.20e-51 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed8g0916 AP2 7.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0916 K14516 - gmx:100527364 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0916 8 7885450 7887643 Aed4g0181 4 1324202 1324903 PCT