Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0915 ATGGAAGAGGAGTCTAATAAGGAGAAAAAGAAGGACACTAATAAGGAGGAGCCGCGGTATAGAGGGGTACGGCGGCGGCCGTGGGGGAAGTTCGCGGCCGAGATTCGGGACCCGGCTCGTCAAGGTACCCGAGTCTGGCTAGGGACATTCCTCACGGCTGAGGAGGCAGCAAGAGCTTATGACCGTGCTGCCTATGAGATGAGGGGTGCTTTGGCCGTTCTCAATTTTCCAAATGAGTATCCCTCATCCTTTTCTATGAACTCATCTTCAACATTAGCACCTTCTTCTTCTTCTACTTCTACTTCTTCTTCTTCAATGCTTAAAAATGATCTTGGTAAACAAGTTTTTGAGTTCGAGTGCTTGGATGACCAATTGTTAGAGGACCTTCTTGATGATTGTGATGACTATGCCTACGAGAAAGAGTTTCCTAAGAACTGA 438 0.4726 MEEESNKEKKKDTNKEEPRYRGVRRRPWGKFAAEIRDPARQGTRVWLGTFLTAEEAARAYDRAAYEMRGALAVLNFPNEYPSSFSMNSSSTLAPSSSSTSTSSSSMLKNDLGKQVFEFECLDDQLLEDLLDDCDDYAYEKEFPKN 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0915 145 Gene3D AP2/ERF domain 19 78 IPR036955 GO:0003700|GO:0006355
Aed8g0915 145 SMART rav1_2 19 83 IPR001471 GO:0003700|GO:0006355
Aed8g0915 145 ProSiteProfiles AP2/ERF domain profile. 19 77 IPR001471 GO:0003700|GO:0006355
Aed8g0915 145 MobiDBLite consensus disorder prediction 83 106 - -
Aed8g0915 145 PANTHER DNA-BINDING DOMAIN 7 134 IPR044808 GO:0003700|GO:0009873
Aed8g0915 145 SUPERFAMILY DNA-binding domain 19 78 IPR016177 GO:0003677
Aed8g0915 145 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Aed8g0915 145 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Aed8g0915 145 Pfam AP2 domain 18 69 IPR001471 GO:0003700|GO:0006355
Aed8g0915 145 PANTHER ETHYLENE RESPONSE FACTOR 7 134 - -
Aed8g0915 145 MobiDBLite consensus disorder prediction 1 22 - -
Aed8g0915 145 CDD AP2 18 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0915 Aed-Chr8 7879695 7880132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0915 1 131 AP2-EREBP Transcription Factor Family AT3G23230 56.296 1.36e-42 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aed8g0915 AP2 2.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0915 - - gmx:100810414 172.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0915 8 7879695 7880132 Aed8g0915 8 7879695 7880132 ECH
Aed8g0915 8 7879695 7880132 Aed4g0182 4 1328881 1329255 PCT