Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0907 ATGACCAAATCCTCGGATGCTGCAGCAGCGTCTCCGTCTTGCAGAGGCAGATCCAAAAAGCCCATTCTCCGAAGCTCCAAAGCAAAAAAGTCTCCAAGCCCCGTTCAGTTCAGTTCCAAGACACCGGAGAAGCCGCCGCAGCGAGTCCGCAACCGCAGCGTCGCGCTCTCCGTCGCCGACATAAGAAAGGCCGCCGGCAAGCGCTTGCAGGAACAGAAGCAATGCACTGAAACGACGTCGTCAGCATCGGCATCGGCGCCGGCGCTGAGCAAAAGCGCCAGGAGACAGATCTCACTGTGGCCTTCTTCTTCTCCTAGTAAACCAAAGACTACTGAAGAAGATGAATCGTTCAAACTTCCCGAGAAATATGAAAAATTGGATGAGTTCTTCAATCGCTTCGATACTTTGATTTCAATACACCGTCTGAGACAGATGACGCCCACCTTTACTTCAATCAGTTCCAGAATTGAATCTTTAACTGACAGGAGATTTACTCACGGCCATCTAGCGCAGATGAAATTCATATTGCCTGAGGCTATTGTTCTCAAGAAGCATCTAGTGCTTGATGAACAGACGCGTTGTATGAAGCCGGATATTCACATTTCGTTGGACCCTGCTTCAGTGGAGGCTGATCCTCAACAACGGAGAGTGTTGCTGAAGAAGGTCTTTCGGGCACGGCTTAAGGAATTTTCGGAATCTCATCCTGAGGGTGTTGAAATTCCAGAAGGTGAATTGCCTGAGCCATTCAATCGCCAAAAGAAAGAAAGTATTTTGGAATCTTGTCTCCCGACAAGATTGTCACTCATATGCTATGGTGACATCGAAGGGTCTTCTGGTGCTCCCCCTGCTACTCCAAGCAAAACCATTGACTACACAGAAAACAAAGAGGGGTCTTTCAAGAGCATTGATGCCATGTCAACACCAGCAAGAAAAACAATTGAGTACACAGAAAACAGAAATGGGTCTCTTGAGAGCATAGATGCCACGTCAACTCCGGCTAAACTTGTTTCTACTCCAATTAGGTTGATGAGTGCCACACCTGCCTTGCGTTCACCCAAAAGACGTTATATGAGCCCAGATGACAACTCTACCAGTTCTTTGAGCAAGTTAGCTAGGTGTCCACCTCGCTCAAGGTCATTGAAATTTGACACTCCAGTGAAGAATAAGGAGTCTCTGGATGGAGACAATGCTGGTGGCTTACCAATAGATGATGATAATTCTGACATCCTCCCAGAAAATCTTATCCAATCAATTAGAGAAAAGGAAAGAATGGCAATGGAGGAAATAGACCCAGCTATCACACAAGCAAAGAAAAGAAAGAAAAATATAGCTAGCCTCCCTAAGCTCTTTGACATGATTCGCAGCTTGCTTCGACAGCAGAATTGTATCACCAAAGTGGAGCTTATAAGCAAGATAATCTCAAGCTGCTCTGATATTGTTGATAGAAGTGAAGCTGAAGAACGGCTAAGTTTGTTGCAAGAACTAGCACCGGAATGGATTTCTGAGAAGCAGATCTCAAGTGGGGATTTCCTATTATTCATAAATAAAATGTCGAGCCCTCAAGCCATTCGAGCATCTCTTGAAGAAGCAACAACATAG 1599 0.4572 MTKSSDAAAASPSCRGRSKKPILRSSKAKKSPSPVQFSSKTPEKPPQRVRNRSVALSVADIRKAAGKRLQEQKQCTETTSSASASAPALSKSARRQISLWPSSSPSKPKTTEEDESFKLPEKYEKLDEFFNRFDTLISIHRLRQMTPTFTSISSRIESLTDRRFTHGHLAQMKFILPEAIVLKKHLVLDEQTRCMKPDIHISLDPASVEADPQQRRVLLKKVFRARLKEFSESHPEGVEIPEGELPEPFNRQKKESILESCLPTRLSLICYGDIEGSSGAPPATPSKTIDYTENKEGSFKSIDAMSTPARKTIEYTENRNGSLESIDATSTPAKLVSTPIRLMSATPALRSPKRRYMSPDDNSTSSLSKLARCPPRSRSLKFDTPVKNKESLDGDNAGGLPIDDDNSDILPENLIQSIREKERMAMEEIDPAITQAKKRKKNIASLPKLFDMIRSLLRQQNCITKVELISKIISSCSDIVDRSEAEERLSLLQELAPEWISEKQISSGDFLLFINKMSSPQAIRASLEEATT 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0907 532 MobiDBLite consensus disorder prediction 358 372 - -
Aed8g0907 532 Pfam DNA replication factor CDT1 like 119 231 IPR014939 -
Aed8g0907 532 SMART CDT1_2 119 247 IPR014939 -
Aed8g0907 532 Gene3D - 404 532 IPR038090 -
Aed8g0907 532 SUPERFAMILY "Winged helix" DNA-binding domain 116 249 IPR036390 -
Aed8g0907 532 MobiDBLite consensus disorder prediction 346 406 - -
Aed8g0907 532 CDD Cdt1_m 115 263 IPR014939 -
Aed8g0907 532 Pfam DNA replication factor Cdt1 C-terminal domain 413 505 IPR032054 -
Aed8g0907 532 MobiDBLite consensus disorder prediction 29 44 - -
Aed8g0907 532 CDD Cdt1_c 409 528 IPR032054 -
Aed8g0907 532 MobiDBLite consensus disorder prediction 71 107 - -
Aed8g0907 532 MobiDBLite consensus disorder prediction 1 118 - -
Aed8g0907 532 PANTHER DNA REPLICATION FACTOR CDT1 19 531 IPR045173 GO:0003677|GO:0030174|GO:0071163
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0907 Aed-Chr8 7832217 7837196 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0907 17 529 Core DNA Replication Machinery Family AT2G31270 39.646 1.76e-92 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0907 K10727 - gmx:100778818 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0907 8 7832217 7837196 Aed8g0907 8 7832217 7837196 ECH