Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0905 ATGGGTAGCAACTTGCACCGACTGCTCAGAAGCTTCTGTTTGGGTACTGAGTGGAAGTATGCCATCTTTTGGAAACTCAAACATCGGGCTCGGATGATCTTGACATGGGAGGATGCTTACTATGACAATCCTAGTAGTTGTAACTCTTCCAACAATAAGAGCTGTCAGAACGCATTGGAGCAGATTGGCAGTGCGGATTTTTCGCATGATCCTCTAGGTTTAGCTGTGGCAAAGATGTCATATCATGTATATTCGTTAGGGGAAGGAATTGTTGGACAGGTAGCTGTTACTGGAAAGCATCGGTGGATCTCTGTAGATAATCAAGTAACAAGTTCTGGCCCATCTTTTGAGTTTGCTGATGGGTGGCAATCTCAGTTTTCTGCTGGAATTAGGACCATTGTTATTGTAGCGGTAGTCCCCCTTGGAGTTGTTCAACTTGGCTCTTTAAATAACGTTGCTGAAGATATGGGGGTTGTAACCTGTGTCCGGAGTCTCTTTTTGTCTACTCAAGATTACACAACAGGTGGTGTTCCTAATCAAGTACAAAATAGAGTGAATTCTTCATATGTGCTGGATACAAAAACTTCAGAAAGCATGCCTGCTTACTTACACAATACAGAGAAAACCATGAAGCATGAAGCACTAGATATTTTAATGCCCTTTCAATGTCCTGGGAAGAATTATTCACTTGATGCTGTTCATCAGAAAATGGTTGTCGATGTTGCCAAGCATGAGGCGCCTGAATTAAACAGTGATGGAAGCTCCATTTTGCTTCAGTCAATTTCAAATATGATGAACATGGAGCAACAGAAATTTGTAGGGATGAGACCTGTAAATGAGAGGAAGCTTAAAGGGAACAATAGTAGCTGTGAAGATACAAGTTTGGAGACAGGAAAAAATGTTTCATCATTTTTACACAATTTGGTTATCAATAGTAACGGTGTTGATGATTTAGTAAGTTCATCAGAAAATGTTAGAAGTGATTCTGTATCCTTCCCTTCAGACTTTCTTGATGCAGCTGTTTGTGAGAGTGATAAGTTTCATAATGTAGATATCAGCCAAAAAGGGGTGTTGAATGTGCCCAGACCTTCAGATGCAAACTCCCAAAAAAATACCGAGAAGTCAAAGTTTCAGACTGAACCGTGTTACAAGGATACCTCATACACAATGAAATTTCCTGCTGGCTATGAGCTACATGAAGCACTTGGACCAAGTTTTCTGAAAGGGAGAACATATTTTGATTGGGCAGCAGAGGCAAATCAAAATGTTAAAACTGCTGAGATGTCAGATGAGATTAGCTGTAGCCAATTGACATCTGAATCTCGCCCAGAGCATCTCTTGGAAGCTATGGTGGCTAACATTTGCCATAATAATAATAATGTTAATAGTGAGTTATCATTTTCGACATCAACGCAGGCTGCAATGGCCTCAGGAAGAAATCCTGAAGATTCTATTCACACTGTGCACACTATTAATTCTGAAGGCTGTTCAATAGATCAGCCCTCTCTTGTTAGAGAGGACAAACATTATAGTTTGAGTTCATCTGGGATATGCAGTGTAATGTCCCCAAAGGGTTTTTCTTCTACATGTCCTAGCTCGTGTAGTGAACAGTTTGAGAGGTCTTCAGAACCAACTAAGAACAACAAGAAGAGGGCTCGGCCTGGGGAAAGTTGTAGGCCTAGGCCAAGGGACAGACAACTTATCCAAGATCGTATTAAGGAGTTGAGGGAACTGGTGCCAAATGGAGCAAAGTGCAGTATTGATTCACTACTGGAGTGCACCATAAAACACATGCTCTTTCTTCAGAACATAACTAAGCATGCTGACAAGCTAAATAAATTTGCAGATACAAAGACAAAGTTGCATCACATGGAAAAAGACATTCCTGGATCATCAAGTTATCAACAAGGTTCAAGTTGGGCAATGGAAGTAGGAGGCCATTTGAAAGTTCGTTCAATATTAGTGGAGAATCTTAATAAGAATGGCCAGATGCTTGTTGAGATGCTGTGTGAAGAGTGCAGCCATTTTCTCGAGATAGCAGAAGCCATCAGAAGCTTGGGTCTGACAATTTTGAATGGTGCAACAGAAGCTCATGGCGAGAAGACATGTATATGTTTTGTGGTTGAGGCAGGATCAGAAGGCCAAAACAACAGAAATTTGCACAGATTGGATATCTTGTGGCCGCTTGTTCAATTATTGCAATCCAAGAGCACAATGTATTCATAA 2226 0.4088 MGSNLHRLLRSFCLGTEWKYAIFWKLKHRARMILTWEDAYYDNPSSCNSSNNKSCQNALEQIGSADFSHDPLGLAVAKMSYHVYSLGEGIVGQVAVTGKHRWISVDNQVTSSGPSFEFADGWQSQFSAGIRTIVIVAVVPLGVVQLGSLNNVAEDMGVVTCVRSLFLSTQDYTTGGVPNQVQNRVNSSYVLDTKTSESMPAYLHNTEKTMKHEALDILMPFQCPGKNYSLDAVHQKMVVDVAKHEAPELNSDGSSILLQSISNMMNMEQQKFVGMRPVNERKLKGNNSSCEDTSLETGKNVSSFLHNLVINSNGVDDLVSSSENVRSDSVSFPSDFLDAAVCESDKFHNVDISQKGVLNVPRPSDANSQKNTEKSKFQTEPCYKDTSYTMKFPAGYELHEALGPSFLKGRTYFDWAAEANQNVKTAEMSDEISCSQLTSESRPEHLLEAMVANICHNNNNVNSELSFSTSTQAAMASGRNPEDSIHTVHTINSEGCSIDQPSLVREDKHYSLSSSGICSVMSPKGFSSTCPSSCSEQFERSSEPTKNNKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLECTIKHMLFLQNITKHADKLNKFADTKTKLHHMEKDIPGSSSYQQGSSWAMEVGGHLKVRSILVENLNKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILNGATEAHGEKTCICFVVEAGSEGQNNRNLHRLDILWPLVQLLQSKSTMYS 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0905 741 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 741 - -
Aed8g0905 741 MobiDBLite consensus disorder prediction 357 378 - -
Aed8g0905 741 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Aed8g0905 741 MobiDBLite consensus disorder prediction 360 378 - -
Aed8g0905 741 MobiDBLite consensus disorder prediction 537 565 - -
Aed8g0905 741 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 741 IPR043561 GO:0003700|GO:0006355
Aed8g0905 741 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 552 601 IPR011598 GO:0046983
Aed8g0905 741 MobiDBLite consensus disorder prediction 542 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0905 Aed-Chr8 7807390 7814322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0905 1 737 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 42.581 7.92e-168 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0905 - - gmx:100777740 1249.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0905 8 7807390 7814322 Aed8g0905 8 7807390 7814322 ECH
Aed4g0187 4 1377022 1383108 Aed8g0905 8 7807390 7814322 PCT