Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0901 ATGACTAGTGGTGGTTCAGGATCTCCTTGTGGAGCCTGCAAATTCTTAAGAAGAAAATGTGCAAGAGGTTGTGTTTTTGCACCTTACTTTTGCCATGAGCAAGGTGCTACACATTTTGCAGCCATTCATAAGGTCTTTGGTGCAAGCAATGTCTCAAAGCTCCTTGCTCACCTTCCTGTGAGTGATCGTTGTGAAGCTGCAGTCACAATCTCATATGAAGCTCAAGCTAGACTTCAGGATCCAATTTATGGCTGTGTCTCCCATATTTTTGCACTCCAACAACAGGTGGTCAATTTACAAGCACAACTGGCTTACCTGAAGGAACAAGCAGCTCAGAGTTGTCTCAATGCCTCTGTGAATGAAAACCCTAATGAAAAACTATTTGAAAAATCTTCTTCTTCTTCTGCTTTACCCCAAGACCTTCAGAGTTGGTTTCAGGTGGAAAATTCCAACCTGGGGCCAGAATTTGTTCCTAACATGTGTACTAATGTGTCAGAACAACATTATGGGAACAATAATGTTCCCATGGAAGATCTAAGCCCTATTGGGATGATTAATAATTATGAAAATTCATCAGGAGCCATGGAAGAAAGCATGAGCTCCTTCTCTAGCCTTGATCATGAGAGTTCTAATAATAATAGCTACTCCATGTCCTATGAATATGATCACATGCAAATTACAAACAGGAGGACGTGGGGTTTTCATGAAGTGGAGGATCTGCATTCAGTGGCATTTGGATACGGAACTCGATGA 753 0.4157 MTSGGSGSPCGACKFLRRKCARGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVSDRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLAYLKEQAAQSCLNASVNENPNEKLFEKSSSSSALPQDLQSWFQVENSNLGPEFVPNMCTNVSEQHYGNNNVPMEDLSPIGMINNYENSSGAMEESMSSFSSLDHESSNNNSYSMSYEYDHMQITNRRTWGFHEVEDLHSVAFGYGTR 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0901 250 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 249 - -
Aed8g0901 250 Coils Coil 89 109 - -
Aed8g0901 250 PANTHER LOB DOMAIN-CONTAINING PROTEIN 17-RELATED 1 249 - -
Aed8g0901 250 Pfam Lateral organ boundaries (LOB) domain 9 107 IPR004883 -
Aed8g0901 250 ProSiteProfiles LOB domain profile. 8 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0901 Aed-Chr8 7759177 7760216 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0901 9 124 AS2 family AT3G58190 83.898 2.42e-71 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aed8g0901 LOB 7.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0901 K13945 - gmx:100776678 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0901 8 7759177 7760216 Aed8g0901 8 7759177 7760216 ECH
Aed4g0189 4 1397119 1398418 Aed8g0901 8 7759177 7760216 PCT