Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed8g0897 | ATGGAATTCAGCAGCTATGATCAATTAGAAGATTCTTCCAAAAGCTCCAGCGAAGAAATAATCGATAATCATGACAATATTGGCACTGGCAGATCCTACGAGTGTGTGTTTTGCAAGAGAGGCTTCACCACTGCACAGGCTTTGGGAGGACACATGAACATTCACAGAAAAGATAGAGCCAACAACAACAAGGCCAAACTCAATTTTCCTTCTTCGAGTTCAACCAAGGTTGATCATCATCATCATATTCATGAGAGTAGTAATAACATTAATAACTATGCAAGCTTTCTCACAAGAGGGAGTTACTATTCTTCTGCTTCTTCTTCCACTCTTCCTGATCAAGAGCTGATGTTTAAAAAGGCTATTATATCTATGAGTGATAAGGGATTAGATAGCAACCCACCATGA | 408 | 0.3922 | MEFSSYDQLEDSSKSSSEEIIDNHDNIGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRANNNKAKLNFPSSSSTKVDHHHHIHESSNNINNYASFLTRGSYYSSASSSTLPDQELMFKKAIISMSDKGLDSNPP | 135 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed8g0897 | 135 | SUPERFAMILY | beta-beta-alpha zinc fingers | 31 | 59 | IPR036236 | - | |
Aed8g0897 | 135 | PANTHER | C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN | 11 | 108 | - | - | |
Aed8g0897 | 135 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Aed8g0897 | 135 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 35 | 55 | IPR013087 | - | |
Aed8g0897 | 135 | PANTHER | OS07G0101800 PROTEIN | 11 | 108 | - | - | |
Aed8g0897 | 135 | Gene3D | Classic Zinc Finger | 9 | 109 | - | - | |
Aed8g0897 | 135 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 33 | 60 | IPR013087 | - | |
Aed8g0897 | 135 | Pfam | C2H2-type zinc finger | 33 | 57 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed8g0897 | Aed-Chr8 | 7731141 | 7733558 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed8g0897 | 33 | 66 | C2H2 Transcription Factor Family | AT5G43540 | 76.471 | 7.27e-15 | 65.1 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Aed8g0897 | zf-C2H2_6 | 9.8e-06 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed8g0897 | - | - | gmx:102661128 | 114.005 |