Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0896 ATGGATATTGTGGGAATTAGTCAGGAGGAGCAGGAGGCTATTTTCAGAGTTGTAGCTGCTATTCTTCATCTTGGAAACGTTAACTTTGCAAAATCAGAAGATACTGATTCATCAGTTATAGAAGATGAAGAATCCAAGTTACATCTCCAAATAACAGCAGAACTTCTCATGTGTGATCCTAATTCTTTGGAAGGTGCACTCCGTGAGCGTGTGATGATTACTCCAGAAGAAATCATCAAAAGAAGTCTTGATCCTCTTGGTTCTACAGTTAGCAGGGATGGTTTAGCCAAAACACTATATTCTCGATTGTTAGTCCAAAAAATTAATATCTCCATTGGGCAGGATCCTAGCTCAAAATGTCTCATTGGTGTTCTTGACATATATGGCTTTGAAAGCTTTCAAACAAATAGTTTTGAGCAGTTTTGTATAAATTTCACAAATGAAAAGCTGCAGCAACACTTCAACCAGCATGTGTTTAAGATGGAGCAAGAGGAATACACAAAAGAAGGGATTGACTGGAGCTACTTAGAATTTGTAGATAATCAAGATGTACTGGATCTCATTGAAAAGGTGGAGTTATTGCTCTGCTTGATGAAGCTTGAGAAGCTTTATCACACATTCAAAGACCACAAACGCTTTATCAAGCCAAAATTGGCACGCTCAGATTTCACTGTTGTTCATTATGCAGGGGAGGTTAAGTATCAATCTGAGCATTTTTTAGACAAGAACAAAGACTATGTTGTTCCTGAACATCAAGACATGCTAAGTGCTTCCAAATGTTCATTTGTATCAGGCCTTTTCCCTCCACTTTCTGAGGAGACATCCAAGTCTGCTAAGTTTTCTTCTATTGGTGCTCGTTTCAAGCTGCAATTACAACAGTTGATGGATACACTCAATCTGACAGAGCCACACTATATTAGATGTGTGAAGCCAAATAGTCTATTAAAACCTAGCATATTTGAAAATATGAACGTTATTCAACAATTACGATCTGGTGGTGTTCTTGAAGCAGTAAGAATTAAATGTGCTGGATTCCCCACTCACTGGACCTTTCATGATTTCTTAACTCGATTAGGCATTCTTGCTCCAGAGGTTCTCCGAGGGAACTTTGAAGAAAAGGATTCATGTAAAAAGATTTTGGAGAAGATTGGGCTGACGGGTTATCAGATAGGGGATACAAAAATATTCCTAAGAGCTGGTCAGATGGCTGAATTGGATGGTCGGAGAGCATTCTTGCTCAGTAGTTCTGCAACAGTTATCCAAAAGCATGCTAGAACTCGTTTAAGTCGGAAAACATATATTTCATTGCATAAGTCCTCTGTTTTTATGCAAACCATTTGCAGAGGAGAACTGGCTCGAAGATTGTATTATCACATGAAGAGGGAAGTAGCTGCAGTCAAAATTCAAAAGTATTCACGTAGAACACTAGCCAGGAAATGGTACACCGAAATAAAGATCTCTGCCAATGTTTTGCAGACAGGTTTACGAGCGATTCCCATTGGCGCGGACATAAAGCTCTCGTTGACTATCAGAACCTTAGAAAAGCATCAATCAGTTTTGGAGACACCAGTGCAAAATGAAAGTCCTTCTATGAAAGAATCTTCAAATCATGTCCAAGAGGAATCCTCAAGTCCTTTCCAAGATGATGAAAGCATTGAAGCTACCAGGGATTTCTCTAGTCCTCTCAAAGACACTGAAGAGACTGAGGTCATGTTGCAGGAAGAAAAACAAAGAGCTGATGAATATGAAAGGAAATATGTAGAAGCTCAAGGATCTAGCGAAGAGTTACGCAAAAAGTTAGCAGAAACTGAGAAAAGAGTATATCAGCTTCAGGACTCGTTGAACAGGATGATATCTTCCATGTCAACTCAAGTTGCCGAGCTGAAGACAATCTTGAGTACTTCATCAAGATTGAGTTCAACTTTTCGGCCTATTGCTAGGGTTGATGTTGCTTCCAGTAACTCTGATACTTCATCTACAGATTCTGATTTCACGTTTCCAGCTCCTGTTTCGAATCCTGAACCCTTTTCTTCCCAAGAGTCAAATTCTTTCCAACTAGTAGTTCAGGATGTCACTGCAGGGGATGGATCGGGATCTGAAAGTGGAAAGGAGGGTTCATTTGATGATTTCTTCTAG 2136 0.3956 MDIVGISQEEQEAIFRVVAAILHLGNVNFAKSEDTDSSVIEDEESKLHLQITAELLMCDPNSLEGALRERVMITPEEIIKRSLDPLGSTVSRDGLAKTLYSRLLVQKINISIGQDPSSKCLIGVLDIYGFESFQTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEGIDWSYLEFVDNQDVLDLIEKVELLLCLMKLEKLYHTFKDHKRFIKPKLARSDFTVVHYAGEVKYQSEHFLDKNKDYVVPEHQDMLSASKCSFVSGLFPPLSEETSKSAKFSSIGARFKLQLQQLMDTLNLTEPHYIRCVKPNSLLKPSIFENMNVIQQLRSGGVLEAVRIKCAGFPTHWTFHDFLTRLGILAPEVLRGNFEEKDSCKKILEKIGLTGYQIGDTKIFLRAGQMAELDGRRAFLLSSSATVIQKHARTRLSRKTYISLHKSSVFMQTICRGELARRLYYHMKREVAAVKIQKYSRRTLARKWYTEIKISANVLQTGLRAIPIGADIKLSLTIRTLEKHQSVLETPVQNESPSMKESSNHVQEESSSPFQDDESIEATRDFSSPLKDTEETEVMLQEEKQRADEYERKYVEAQGSSEELRKKLAETEKRVYQLQDSLNRMISSMSTQVAELKTILSTSSRLSSTFRPIARVDVASSNSDTSSTDSDFTFPAPVSNPEPFSSQESNSFQLVVQDVTAGDGSGSESGKEGSFDDFF 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0896 711 Gene3D - 413 466 - -
Aed8g0896 711 Gene3D Kinesin motor domain 115 340 IPR036961 -
Aed8g0896 711 Pfam IQ calmodulin-binding motif 464 481 IPR000048 GO:0005515
Aed8g0896 711 Pfam IQ calmodulin-binding motif 415 433 IPR000048 GO:0005515
Aed8g0896 711 Pfam IQ calmodulin-binding motif 437 456 IPR000048 GO:0005515
Aed8g0896 711 SMART iq_5 460 482 IPR000048 GO:0005515
Aed8g0896 711 SMART iq_5 435 457 IPR000048 GO:0005515
Aed8g0896 711 SMART iq_5 412 434 IPR000048 GO:0005515
Aed8g0896 711 MobiDBLite consensus disorder prediction 651 711 - -
Aed8g0896 711 Pfam Myosin head (motor domain) 1 398 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed8g0896 711 Coils Coil 565 613 - -
Aed8g0896 711 PANTHER MYOSIN 1 539 - -
Aed8g0896 711 SMART MYSc_2a 1 411 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed8g0896 711 Gene3D - 131 301 - -
Aed8g0896 711 ProSiteProfiles Myosin motor domain profile. 1 410 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed8g0896 711 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 491 IPR027417 -
Aed8g0896 711 MobiDBLite consensus disorder prediction 550 582 - -
Aed8g0896 711 MobiDBLite consensus disorder prediction 651 696 - -
Aed8g0896 711 ProSiteProfiles IQ motif profile. 436 465 IPR000048 GO:0005515
Aed8g0896 711 MobiDBLite consensus disorder prediction 519 542 - -
Aed8g0896 711 Gene3D - 344 411 - -
Aed8g0896 711 Gene3D Myosin VI head, motor domain, U50 subdomain 7 279 - -
Aed8g0896 711 PRINTS Myosin heavy chain signature 174 202 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed8g0896 711 PRINTS Myosin heavy chain signature 121 149 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed8g0896 711 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 549 649 - -
Aed8g0896 711 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 1 539 - -
Aed8g0896 711 MobiDBLite consensus disorder prediction 519 582 - -
Aed8g0896 711 PANTHER MYOSIN 549 649 - -
Aed8g0896 711 ProSiteProfiles IQ motif profile. 461 489 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0896 Aed-Chr8 7702464 7717845 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0896 1 498 Myosins gene family AT1G08730 68.544 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0896 K10357 - gmx:100803485 1157.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0896 8 7702464 7717845 Aed8g0896 8 7702464 7717845 ECH