Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0882 ATGGAGGAGGTTGAGCAAGCTAATAGAGTAGCTGTTGAGAGCTGTCATAGGGTTCTGAGTTTGTTGTCTCAACCAAGGGATCAGGTTCAGCATAGGAATTTAATGGTGGAAACTGGTGAAGCTGTGGTGAGGAAACATAGAGTGAAGAGGGCAATTAAGGTGCCTGCTATCAGCAACAAACTTGCGGATATCCCTCCTGATGATTATTCATGGAGGAAGTACGGGCAGAAGCCAATCAAGGGCTCTCCTCACCCTAGGGGATATTATAAGTGCAGCAGCATGAGAGGGTGTCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGAAGAGCCTACCATGCTAATGGTTACCTATGAAGGCGAACATAACCACCCAAAGTTACCAACAACACAATCTGCAAATGCATGA 405 0.4667 MEEVEQANRVAVESCHRVLSLLSQPRDQVQHRNLMVETGEAVVRKHRVKRAIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPTMLMVTYEGEHNHPKLPTTQSANA 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0882 134 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 44 IPR044810 GO:0003700
Aed8g0882 134 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 44 133 IPR044810 GO:0003700
Aed8g0882 134 SMART WRKY_cls 65 125 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed8g0882 134 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 2 44 - -
Aed8g0882 134 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 44 133 - -
Aed8g0882 134 Pfam WRKY DNA -binding domain 67 124 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed8g0882 134 ProSiteProfiles WRKY domain profile. 60 126 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed8g0882 134 SUPERFAMILY WRKY DNA-binding domain 63 125 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed8g0882 134 Gene3D WRKY domain 43 127 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed8g0882 134 Pfam Plant zinc cluster domain 44 63 IPR018872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0882 Aed-Chr8 7561793 7564402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0882 1 48 WRKY Transcription Factor Family AT2G30590 60.784 5.50e-10 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed8g0882 WRKY 1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0882 - - gmx:100792310 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0882 8 7561793 7564402 Aed8g0882 8 7561793 7564402 ECH