Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed8g0878 | ATGGCTACACCACGCAGCGAAGTGGACGTAAATCTGCATGCAGTGGTAGTACTGAATACTGATCAAACCTCGAGGACGTGGGGAATTATGACGATGATGATGATGAAGCGGTCAGTGAGAGTGAAGAGAGATGCGGTTGCAGCATGCATGACTTGCCCGCTTTGCACAAACTTCCTCAAAGATGCCACTGCTATTTCTCTATGCCTTCATACGAAGTGTATTTATGACAAAATTACAGATGAAGAATTGGAAAATTGTCCAGTATGCAACATTGATTTGGGCATTGTTCCGCTTGAGAAAATGAGGCCAGATAACAGTTTGCAAGATTTAAGGAACAAAATTTTCCCTTTCAAAAAAAGAAAGGAGAAGGCTCCGGTATCTGTCTCCTCAGTACCACTACCAGCTAGAAGAAAGGAGAGATCACTTTCATCTTTGGTTGTCAGCACTCCAAGGGTATGTACACAGTCAACCATGACAGGAAGAAGAACAAAGCCTGCAAGAAAGGCTAGTAGCCTGCAGGGATCTAGTTTCTCCATTGAGAAGCTCATTAAAAAAGAAGAGGAATTACTGGAAGATCACCAAGATAATTCATGCTCACCTGACACTTCAAACAAGTCTGCTAAGAATGGTGGACAGAGTTTATCACCTTGCAAAAATAGCCAATCCATTTGCAATAGAGGACCACAGAATGGTGCTGAACCACAGGAAGCAAAATGGGATCTTTGGAAAACTTTAAATTATTTAGCAGAGGCTGCAAGTAGGAGTAAGCCTTTCAAGTCTAATGTGCAAGTGTCGGATGCTAAACTAGAACCCATGAAAGTAACTGACAGTGATGCCAAAGTTCTGAAAGCCAAAATTAAGGGAAAGAAGCGCAAGGCAAAAGTTGAAGATGAAAAGATTAGCACTGGTCATGTCTCTTCAGATACAGCAAAATTCAACAAATTGCGAAGAGTTCGCCCAAAAAAGGAACCTGCTTTTGGAGAATATAGAATGTCACCTCAGGCTGTTTTGGATGCTACTGACAGTAATCTCTTAAGGAATGATTCAATTTGGTTCTCCTTATCAGCTTCTGAAAACCAGGAAGGAGATGCACCTTTACCGCAAATTCCTTCAAATTATGTTGAGATTAAATGCATGGGACATCCGGTGCTTCCTTCACTGCAGGTACAAAATTTGGTTGAACTGTGGCTTGATACGACGGCATCTTCAGGACACAGAATTCCAGCAACCATTGGATCCTCGGGGAAAGATTTTGTCATGATCCTAACTTATGGTCGGAAGGTCCTACACCCTTGA | 1296 | 0.4213 | MATPRSEVDVNLHAVVVLNTDQTSRTWGIMTMMMMKRSVRVKRDAVAACMTCPLCTNFLKDATAISLCLHTKCIYDKITDEELENCPVCNIDLGIVPLEKMRPDNSLQDLRNKIFPFKKRKEKAPVSVSSVPLPARRKERSLSSLVVSTPRVCTQSTMTGRRTKPARKASSLQGSSFSIEKLIKKEEELLEDHQDNSCSPDTSNKSAKNGGQSLSPCKNSQSICNRGPQNGAEPQEAKWDLWKTLNYLAEAASRSKPFKSNVQVSDAKLEPMKVTDSDAKVLKAKIKGKKRKAKVEDEKISTGHVSSDTAKFNKLRRVRPKKEPAFGEYRMSPQAVLDATDSNLLRNDSIWFSLSASENQEGDAPLPQIPSNYVEIKCMGHPVLPSLQVQNLVELWLDTTASSGHRIPATIGSSGKDFVMILTYGRKVLHP | 431 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed8g0878 | 431 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE DRIP1 | 36 | 377 | - | - | |
Aed8g0878 | 431 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 35 | 132 | IPR013083 | - | |
Aed8g0878 | 431 | MobiDBLite | consensus disorder prediction | 190 | 235 | - | - | |
Aed8g0878 | 431 | MobiDBLite | consensus disorder prediction | 139 | 174 | - | - | |
Aed8g0878 | 431 | MobiDBLite | consensus disorder prediction | 142 | 174 | - | - | |
Aed8g0878 | 431 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE DRIP1 | 374 | 427 | - | - | |
Aed8g0878 | 431 | SUPERFAMILY | RING/U-box | 48 | 112 | - | - | |
Aed8g0878 | 431 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE DRIP1 | 374 | 427 | IPR044807 | GO:0004842 | |
Aed8g0878 | 431 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE DRIP1 | 36 | 377 | IPR044807 | GO:0004842 | |
Aed8g0878 | 431 | MobiDBLite | consensus disorder prediction | 196 | 229 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed8g0878 | Aed-Chr8 | 7522592 | 7530511 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed8g0878 | 39 | 377 | C3H Transcription Factor Family | AT2G30580 | 48.397 | 3.74e-94 | 285 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed8g0878 | K16277 | - | gmx:100778462 | 676.396 |