Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0869 ATGGCGAATCATCACCCCTCCGACGCACCAACCGACGATTTCCTCGAGCAAATCCTCGGCCTCCCGACCTTCGCCTCCGCCGACGCCTCTCCGATGATGCTCCAGCTCAACTCCGCCGACGCCGCCGCCTTCCACGCGCCGCCGTACCAGCTCGGCCTCAGCTTGGACCAAGGTAAGGGATCCTTCCTCGCGCCCGAGGATGCTTCTGGAAGCGGCAAGCGCTTCCGTGACGACGTCGTTGATACCAGGCCTAAGAACGTTTTTCGTGGACAACCCATGCCTACTACTGCTGTTCCTACTGCTCCACATCCACCAGCAGTGCGACCTAGAGTGCGTGCTAGAAGAGGACAGGCTACAGATCCACATAGTATAGCTGAAAGGTTGCGCAGAGAGAGAATAGCAGAAAGAATCAGGGCTTTGCAAGATCTGGTCCCTAGTGTCAACAAGACAGATAGAGCTGCCATGCTGGACGAAATTGTGGATTATGTCAAGTTCTTGAGGCTTCAAGTGAAGGTTTTGAGCATGAGTAGATTGGGTGGAGCTGGTGCAGTGGCACCACTGGTAACTGACATCCCATTATCGTCAGTTGAGGAAGAAGGTGGTGGTGAGGGAAGAAACCAGCCAGCTTGGGAGAAGTGGTCAAATGATGGCACAGAAAAACAGGTTGCCAAGCTTATGGAAGAAAATGTTGGAGCTGCCATGCAGTTTCTTCAATCAAAAGCACTCTGCATCATGCCCATCTCACTAGCATCAGCAATATACCAGACACAACCGTCAGACACTTCTAGTATAGTTAAGCCTGAAACTAATAATCCTCCTCCATAG 825 0.5236 MANHHPSDAPTDDFLEQILGLPTFASADASPMMLQLNSADAAAFHAPPYQLGLSLDQGKGSFLAPEDASGSGKRFRDDVVDTRPKNVFRGQPMPTTAVPTAPHPPAVRPRVRARRGQATDPHSIAERLRRERIAERIRALQDLVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGGGEGRNQPAWEKWSNDGTEKQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQTQPSDTSSIVKPETNNPPP 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0869 274 Pfam Helix-loop-helix DNA-binding domain 122 166 IPR011598 GO:0046983
Aed8g0869 274 MobiDBLite consensus disorder prediction 84 121 - -
Aed8g0869 274 Gene3D - 112 174 IPR036638 GO:0046983
Aed8g0869 274 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 7 262 - -
Aed8g0869 274 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 262 - -
Aed8g0869 274 MobiDBLite consensus disorder prediction 196 215 - -
Aed8g0869 274 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 117 166 IPR011598 GO:0046983
Aed8g0869 274 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 115 176 IPR036638 GO:0046983
Aed8g0869 274 SMART finulus 123 172 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0869 Aed-Chr8 7423489 7428500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0869 44 273 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 79.325 1.47e-113 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aed8g0869 HLH 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0869 - - gmx:100793177 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0869 8 7423489 7428500 Aed8g1840 8 23110330 23114530 ECH
Aed8g0869 8 7423489 7428500 Aed8g0869 8 7423489 7428500 ECH